RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 LNX1Q8TBB1 728 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 SLC22A17Q8WUG5 538 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 RIN2Q8WYP3 895 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 KLHL5Q96PQ7 755 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 ASB2Q96Q27 587 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 TLE6Q9H808 572 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 NEUROD4Q9HD90 331 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 INTS13Q9NVM9 706 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 RMND1Q9NWS8 449 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 DPP3Q9NY33 737 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 PUF60Q9UHX1 559 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 DERAQ9Y315 318 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 TIMM13Q9Y5L4 95 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 IRAK3Q9Y616 596 aa10.22□□□□□ -0.77
NPLOC4-219ENST00000576713 SF3B1O75533 1304 aaKnown RBP eCLIP10.22□□□□□ -0.772e-7■■■■□ 26.7
NPLOC4-219ENST00000576713 TGFBR3LH3BV60 316 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 LRRN2O75325 713 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CST3P01034 146 aaPredicted RBP10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 SPATA31D3P0C874 917 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 TRIM49P0CI25 452 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 TRIM49CP0CI26 452 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 DLATP10515 647 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 NR2F2P24468 414 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 POLR2BP30876 1174 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 RPL9P32969 192 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 MCM4P33991 863 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CA8P35219 290 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 GLUD2P49448 558 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 KCNQ1P51787 676 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CDR1P51861 262 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 LILRA4P59901 499 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CLUL1Q15846 466 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 NFIL3Q16649 462 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 USP41Q3LFD5 358 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CEP135Q66GS9 1140 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 TTI2Q6NXR4 508 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 SPATA31D4Q6ZUB0 917 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CEP57Q86XR8 500 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 ETFBKMTQ8IXQ9 262 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 EFHBQ8N7U6 833 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 BEST2Q8NFU1 509 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 PARD3BQ8TEW8 1205 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CCDC47Q96A33 483 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 PABPC5Q96DU9 382 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CGRRF1Q99675 332 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 RTP3Q9BQQ7 232 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CLSTN3Q9BQT9 956 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 NUCKS1Q9H1E3 243 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 NUP62CLQ9H1M0 184 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 UBE2ZQ9H832 354 aaPredicted RBP10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 RXFP1Q9HBX9 757 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 NGRNQ9NPE2 291 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CLDND1Q9NY35 253 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CGNQ9P2M7 1197 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 CTNND2Q9UQB3 1225 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 HCFC2Q9Y5Z7 792 aa10.21□□□□□ -0.77
NPLOC4-219ENST00000576713 M0QZQ0 153 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 KIAA0391O15091 583 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 HCRTO43612 131 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 TBC1D4O60343 1298 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 VNN1O95497 513 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 VNN2O95498 520 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 URODP06132 367 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 KCNA5P22460 613 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 MPSTP25325 297 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 CLCN4P51793 760 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 STX17P56962 302 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 MRPS5P82675 430 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 UBAP2LQ14157 1087 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 MRPL58Q14197 206 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 CCDC142Q17RM4 750 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 DPCR1Q3MIW9 517 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 TDRD10Q5VZ19 366 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 KLHL10Q6JEL2 608 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 RBM43Q6ZSC3 357 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 C12orf76Q8N812 135 aaPredicted RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 GOLGA5Q8TBA6 731 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 PIK3R5Q8WYR1 880 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 MSLNLQ96KJ4 702 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 TMEM209Q96SK2 561 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 TTPALQ9BTX7 342 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 APOL5Q9BWW9 433 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 KIAA1586Q9HCI6 787 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 MRPL17Q9NRX2 175 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 TMEM63CQ9P1W3 806 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 NXF1Q9UBU9 619 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 DMGDHQ9UI17 866 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 HOOK1Q9UJC3 728 aaKnown RBP10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 COG5Q9UP83 839 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 AGAP1Q9UPQ3 857 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 NME7Q9Y5B8 376 aa10.2□□□□□ -0.78
NPLOC4-219ENST00000576713 SCN1AP35498 2009 aa10.19□□□□□ -0.78
NPLOC4-219ENST00000576713 CALUO43852 315 aaPredicted RBP10.19□□□□□ -0.78
NPLOC4-219ENST00000576713 C4BPAP04003 597 aaKnown RBP10.19□□□□□ -0.78
NPLOC4-219ENST00000576713 OR4Q2P0C623 313 aa10.19□□□□□ -0.78
NPLOC4-219ENST00000576713 CCNE1P24864 410 aa10.19□□□□□ -0.78
NPLOC4-219ENST00000576713 PPP3CAQ08209 521 aa10.19□□□□□ -0.78
NPLOC4-219ENST00000576713 ADAM9Q13443 819 aa10.19□□□□□ -0.78
NPLOC4-219ENST00000576713 MYBPC2Q14324 1141 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms