RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 NOTCH4Q99466 2003 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 AKAP3O75969 853 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 VNN1O95497 513 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 RFX1P22670 979 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 WARSP23381 471 aaKnown RBP16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 GABRR2P28476 465 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 AVPR2P30518 371 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 VIPR2P41587 438 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 PRCPP42785 496 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 VAMP7P51809 220 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 AP3M2P53677 418 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 EPHA5P54756 1037 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 NCOA4Q13772 614 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 ZNF699Q32M78 642 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 STXBP5Q5T5C0 1151 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 ZNF658Q5TYW1 1059 aaPredicted RBP16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 LIMS2Q7Z4I7 341 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 SCN4BQ8IWT1 228 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 FAM186BQ8IYM0 893 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 TMC2Q8TDI7 906 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 SYAP1Q96A49 352 aaPredicted RBP16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 GSDMAQ96QA5 445 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 XYLT2Q9H1B5 865 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 WNT16Q9UBV4 365 aa16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 MAGED2Q9UNF1 606 aaPredicted RBP16.69■□□□□ 0.26
AC009088.3-201ENST00000563605 KRBA1A5PL33 1030 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 MICAL2O94851 1124 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 TRIM49P0CI25 452 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 TRIM49CP0CI26 452 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 KRT13P13646 458 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 ATICP31939 592 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 PSMC2P35998 433 aaKnown RBP16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 CDH8P55286 799 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 CLDN10P78369 228 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 CYP27A1Q02318 531 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 GRM2Q14416 872 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 SCARA5Q6ZMJ2 495 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 GAREM2Q75VX8 874 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 ZSCAN18Q8TBC5 510 aaPredicted RBP16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 SPATA18Q8TC71 538 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 TMEM174Q8WUU8 243 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 PKMYT1Q99640 499 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 ZFP14Q9HCL3 533 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 MAGEC2Q9UBF1 373 aaPredicted RBP16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 CDH9Q9ULB4 789 aa16.68■□□□□ 0.26
AC009088.3-201ENST00000563605 A8MXQ7 604 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 ECI2O75521 394 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 NPR3P17342 541 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 RAP1GAPP47736 663 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 GCLMP48507 274 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 RPL10AP62906 217 aaKnown RBP16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 CYP4F8P98187 520 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 ZNF667Q5HYK9 610 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 MDH1BQ5I0G3 518 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 C1orf220Q5T0J3 134 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 GPR158Q5T848 1215 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 FAM171BQ6P995 826 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 SV2AQ7L0J3 742 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 SMARCD2Q92925 531 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 ASB16Q96NS5 453 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 TSG101Q99816 390 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 SMYD3Q9H7B4 428 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 CRTAC1Q9NQ79 661 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 SLC2A4RGQ9NR83 387 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 TSC2P49815 1807 aa16.67■□□□□ 0.26
AC009088.3-201ENST00000563605 BIN1O00499 593 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 CETN3O15182 167 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 PI15O43692 258 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 TACC1O75410 805 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 BDNFP23560 247 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 FCARP24071 287 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 PIK3CAP42336 1068 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 NFIL3Q16649 462 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 SGSM1Q2NKQ1 1148 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 ZACNQ401N2 412 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 ZCWPW2Q504Y3 356 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 ARHGAP15Q53QZ3 475 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 ANKRD40Q6AI12 368 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 ASTLQ6HA08 431 aaPredicted RBP16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 SPOPLQ6IQ16 392 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 C4orf50Q6ZRC1 276 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 INTS8Q75QN2 995 aaKnown RBP16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 TMEM105Q8N8V8 129 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 MYLPFQ96A32 169 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 ELSPBP1Q96BH3 223 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 GCNAQ96QF7 691 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 GPR88Q9GZN0 384 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 DPEP3Q9H4B8 488 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 MAN1B1Q9UKM7 699 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 NME7Q9Y5B8 376 aa16.66■□□□□ 0.26
AC009088.3-201ENST00000563605 ZDBF2Q9HCK1 2354 aa16.65■□□□□ 0.26
AC009088.3-201ENST00000563605 SLC38A8A6NNN8 435 aa16.65■□□□□ 0.26
AC009088.3-201ENST00000563605 IKBKBO14920 756 aa16.65■□□□□ 0.26
AC009088.3-201ENST00000563605 FGF19O95750 216 aa16.65■□□□□ 0.26
AC009088.3-201ENST00000563605 STAU1O95793 577 aaKnown RBP16.65■□□□□ 0.26
AC009088.3-201ENST00000563605 HLA-DRAP01903 254 aa16.65■□□□□ 0.26
AC009088.3-201ENST00000563605 PTPN1P18031 435 aaKnown RBP16.65■□□□□ 0.26
AC009088.3-201ENST00000563605 GRIK1P39086 918 aa16.65■□□□□ 0.26
AC009088.3-201ENST00000563605 PMS1P54277 932 aaKnown RBP16.65■□□□□ 0.26
AC009088.3-201ENST00000563605 PPP3CAQ08209 521 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms