RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ZNF334Q9HCZ1 680 aaPredicted RBP16.84■□□□□ 0.29
USB1-208ENST00000563207 RWDD2AQ9UIY3 292 aa16.84■□□□□ 0.29
USB1-208ENST00000563207 MTMR11A4FU01 709 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 FAM170BA6NMN3 283 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 FGFR1OPO95684 399 aaKnown RBP16.83■□□□□ 0.28
USB1-208ENST00000563207 SP9P0CG40 484 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 ERCC5P28715 1186 aaPredicted RBP16.83■□□□□ 0.28
USB1-208ENST00000563207 CYP24A1Q07973 514 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 GPR17Q13304 367 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 CYP4A22Q5TCH4 519 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 CEP135Q66GS9 1140 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 KLHL10Q6JEL2 608 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 LRRTM3Q86VH5 581 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 TMC8Q8IU68 726 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 C1orf210Q8IVY1 113 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 RDH13Q8NBN7 331 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 ELSPBP1Q96BH3 223 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 BORCS6Q96GS4 357 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 CEP63Q96MT8 703 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 FNBP1Q96RU3 617 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 LTB4R2Q9NPC1 389 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 DPP3Q9NY33 737 aa16.83■□□□□ 0.28
USB1-208ENST00000563207 A0A1W2PRU2 124 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 SLC16A3O15427 465 aaKnown RBP16.82■□□□□ 0.28
USB1-208ENST00000563207 EPB41P11171 864 aaKnown RBP16.82■□□□□ 0.28
USB1-208ENST00000563207 TYMPP19971 482 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 TARSP26639 723 aaKnown RBP16.82■□□□□ 0.28
USB1-208ENST00000563207 AP3M2P53677 418 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 EPHA5P54756 1037 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 MCCD1P59942 119 aaPredicted RBP16.82■□□□□ 0.28
USB1-208ENST00000563207 FZD5Q13467 585 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 NFKBIBQ15653 356 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 IQCEQ6IPM2 695 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 TTI2Q6NXR4 508 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 INTS8Q75QN2 995 aaKnown RBP16.82■□□□□ 0.28
USB1-208ENST00000563207 WDR49Q8IV35 697 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 TMC2Q8TDI7 906 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 LRRC3BQ96PB8 259 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 ZFP14Q9HCL3 533 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 PDE11AQ9HCR9 933 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 ANO10Q9NW15 660 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 CTNND2Q9UQB3 1225 aa16.82■□□□□ 0.28
USB1-208ENST00000563207 DCHS1Q96JQ0 3298 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 DMXL1Q9Y485 3027 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 FANCMQ8IYD8 2048 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 OR6C75A6NL08 312 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 CYB561D2O14569 222 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 IKBKBO14920 756 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 AKAP3O75969 853 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 GNA14O95837 355 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 ODC1P11926 461 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 PMS1P54277 932 aaKnown RBP16.81■□□□□ 0.28
USB1-208ENST00000563207 CLDN10P78369 228 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 PRKCQQ04759 706 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 STX1AQ16623 288 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 DUOXA2Q1HG44 320 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 DPCR1Q3MIW9 517 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 SLC39A12Q504Y0 691 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 WSCD1Q658N2 575 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 GAREM2Q75VX8 874 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 FILIP1Q7Z7B0 1213 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 FAM186BQ8IYM0 893 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 ELMOD1Q8N336 334 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 STKLD1Q8NE28 680 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 ZSCAN18Q8TBC5 510 aaPredicted RBP16.81■□□□□ 0.28
USB1-208ENST00000563207 PARD3BQ8TEW8 1205 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 SMARCD2Q92925 531 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 SHDQ96IW2 340 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 ANKRD36BP1Q96IX9 119 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 LPIN3Q9BQK8 851 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 ASAH2Q9NR71 780 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 INTS13Q9NVM9 706 aa16.81■□□□□ 0.28
USB1-208ENST00000563207 TRIM49BA6NDI0 452 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 ZNF197O14709 1029 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 MICAL2O94851 1124 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 TMEM191BP0C7N4 346 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 KRT13P13646 458 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 GDI1P31150 447 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 CASP4P49662 377 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 CCDC142Q17RM4 750 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 TSSK4Q6SA08 328 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 DNAJB7Q7Z6W7 309 aaPredicted RBP16.8■□□□□ 0.28
USB1-208ENST00000563207 ZNF687Q8N1G0 1237 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 CSGALNACT2Q8N6G5 542 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 CGRRF1Q99675 332 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 DUSP9Q99956 384 aaKnown RBP16.8■□□□□ 0.28
USB1-208ENST00000563207 TRMT61BQ9BVS5 477 aaKnown RBP16.8■□□□□ 0.28
USB1-208ENST00000563207 ZCWPW1Q9H0M4 648 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 BRD9Q9H8M2 597 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 METTL14Q9HCE5 456 aaKnown RBP16.8■□□□□ 0.28
USB1-208ENST00000563207 TMLHEQ9NVH6 421 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 SPATA6Q9NWH7 488 aaPredicted RBP16.8■□□□□ 0.28
USB1-208ENST00000563207 ITGA11Q9UKX5 1188 aa16.8■□□□□ 0.28
USB1-208ENST00000563207 NDRG2Q9UN36 371 aaKnown RBP16.8■□□□□ 0.28
USB1-208ENST00000563207 HEPACAM2A8MVW5 462 aa16.79■□□□□ 0.28
USB1-208ENST00000563207 HCRTO43612 131 aa16.79■□□□□ 0.28
USB1-208ENST00000563207 TNNC2P02585 160 aa16.79■□□□□ 0.28
USB1-208ENST00000563207 CYP11A1P05108 521 aa16.79■□□□□ 0.28
USB1-208ENST00000563207 ATF6P18850 670 aa16.79■□□□□ 0.28
USB1-208ENST00000563207 TNNI1P19237 187 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms