RNA–Protein interactions for RNA: ENST00000562204.1

ACSF3-216, Transcript of acyl-CoA synthetase family member 3, human

TSL 3

Gene ACSF3, Length 581 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF3-216	ENST00000562204	UBN1	Q9NPG3	1134 aa		13.76	□□□□□ -0.21
ACSF3-216	ENST00000562204	TAB2	Q9NYJ8	693 aa		13.76	□□□□□ -0.21
ACSF3-216	ENST00000562204	CPSF3	Q9UKF6	684 aa	Known RBP	13.76	□□□□□ -0.21
ACSF3-216	ENST00000562204	MRPS17	Q9Y2R5	130 aa	Known RBP	13.76	□□□□□ -0.21
ACSF3-216	ENST00000562204	ARL5C	A6NH57	179 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	LGALS16	A8MUM7	142 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	RET	P07949	1114 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	ITGA4	P13612	1032 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	SCNN1G	P51170	649 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	COPB1	P53618	953 aa	Known RBP	13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	NRL	P54845	237 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	UBASH3A	P57075	661 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	OSTN	P61366	133 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	FKBP15	Q5T1M5	1219 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	PRR23C	Q6ZRP0	262 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	PRR23B	Q6ZRT6	265 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	CEP120	Q8N960	986 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	SMG8	Q8ND04	991 aa	Known RBP	13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	ZSWIM2	Q8NEG5	633 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	ACAP3	Q96P50	834 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	GAD1	Q99259	594 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	COLEC11	Q9BWP8	271 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	GPR62	Q9BZJ7	368 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	TRIM5	Q9C035	493 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	NXF3	Q9H4D5	531 aa	Known RBP	13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	SEMA4G	Q9NTN9	838 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	IPP	Q9Y573	584 aa		13.75	□□□□□ -0.21
ACSF3-216	ENST00000562204	GREB1	Q4ZG55	1949 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	COL4A2	P08572	1712 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	TULP1	O00294	542 aa	Predicted RBP	13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	XYLB	O75191	536 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	AFP	P02771	609 aa	Known RBP	13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	C8A	P07357	584 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	CXCL8	P10145	99 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	PML	P29590	882 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	TNFSF9	P41273	254 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	ADCY1	Q08828	1119 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	PPP2R5D	Q14738	602 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	ENOX2	Q16206	610 aa	Known RBP	13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	SEZ6	Q53EL9	994 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	PPM1L	Q5SGD2	360 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	CD302	Q8IX05	232 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	NPAS3	Q8IXF0	933 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	CELF5	Q8N6W0	485 aa	Known RBP	13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	ITFG1	Q8TB96	612 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	PARD3B	Q8TEW8	1205 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	DDX1	Q92499	740 aa	Known RBP	13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	SLC35C1	Q96A29	364 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	CCDC127	Q96BQ5	260 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	ZFP42	Q96MM3	310 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	CGRRF1	Q99675	332 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	CHRD	Q9H2X0	955 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	NDST4	Q9H3R1	872 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	PLEKHA5	Q9HAU0	1116 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	HEBP1	Q9NRV9	189 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	IFNK	Q9P0W0	207 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	ADAM28	Q9UKQ2	775 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	POLI	Q9UNA4	740 aa		13.74	□□□□□ -0.21
ACSF3-216	ENST00000562204	TICRR	Q7Z2Z1	1910 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204		A0A1B0GTH6	734 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	LRRC10B	A6NIK2	292 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	CCL16	O15467	120 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	RECQL4	O94761	1208 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	TRIM49	P0CI25	452 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	TRIM49C	P0CI26	452 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	DLAT	P10515	647 aa	Known RBP	13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	HOXA9	P31269	272 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	GTF2H1	P32780	548 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	AP3M2	P53677	418 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	CSRP2	Q16527	193 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	VWA3B	Q502W6	1294 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	APTX	Q7Z2E3	356 aa	Known RBP	13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	FAM212A	Q96EL1	285 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	IER2	Q9BTL4	223 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	APOL6	Q9BWW8	343 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	VPS16	Q9H269	839 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	ASB7	Q9H672	318 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	PDE11A	Q9HCR9	933 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	SNTG2	Q9NY99	539 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	PARP2	Q9UGN5	583 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	SPAG17	Q6Q759	2223 aa		13.73	□□□□□ -0.21
ACSF3-216	ENST00000562204	VWA8	A3KMH1	1905 aa		13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	8e-6	■■■■■ 107
ACSF3-216	ENST00000562204	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	GDF9	O60383	454 aa		13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	ECI2	O75521	394 aa		13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	POU2F2	P09086	479 aa		13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	TNNI1	P19237	187 aa		13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	MXI1	P50539	228 aa		13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	MCCD1	P59942	119 aa	Predicted RBP	13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	SHC2	P98077	582 aa		13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	MYL7	Q01449	175 aa		13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	CETN1	Q12798	172 aa		13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	KCNH2	Q12809	1159 aa		13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	FZD5	Q13467	585 aa		13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	PABPC1L	Q4VXU2	614 aa	Known RBP	13.72	□□□□□ -0.21
ACSF3-216	ENST00000562204	MIIP	Q5JXC2	388 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms