RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 HADHBP55084 474 aaKnown RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 RIPK4P57078 832 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 DSTNP60981 165 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 HTRA3P83110 453 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 BEX3Q00994 111 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 SLC14A1Q13336 389 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 NAA25Q14CX7 972 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 DPYSL2Q16555 572 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ERCC6LQ2NKX8 1250 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ARL13BQ3SXY8 428 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZNF362Q5T0B9 420 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 PDPK2PQ6A1A2 396 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 RPUSD3Q6P087 351 aaKnown RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 NEK5Q6P3R8 708 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 TUBA3EQ6PEY2 450 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 SASS6Q6UVJ0 657 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 LRSAM1Q6UWE0 723 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 AGMOQ6ZNB7 445 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 CYFIP1Q7L576 1253 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 RFX6Q8HWS3 928 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 GRAMD2AQ8IUY3 354 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 FAM9CQ8IZT9 166 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 REXO1Q8N1G1 1221 aaKnown RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 OR2C3Q8N628 320 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 FAM156AQ8NDB6 213 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 CEP76Q8TAP6 659 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZNF483Q8TF39 744 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 RNF139Q8WU17 664 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 RFFLQ8WZ73 363 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 TBC1D5Q92609 795 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 PPP2R3CQ969Q6 453 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 EFHD2Q96C19 240 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 NSUN4Q96CB9 384 aaKnown RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 LIN37Q96GY3 246 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 CCDC120Q96HB5 630 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 KIRREL1Q96J84 757 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 VPS50Q96JG6 964 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 CDC6Q99741 560 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 NTPCRQ9BSD7 190 aaKnown RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 TMEM120AQ9BXJ8 343 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 GCOM2Q9BZD3 368 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 CCSER1Q9C0I3 900 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 OR10A4Q9H209 315 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 MMADHCQ9H3L0 296 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ERVMER34-1Q9H9K5 563 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 PDE7BQ9NP56 450 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 ARHGEF4Q9NR80 690 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 VPS45Q9NRW7 570 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 GLRX2Q9NS18 164 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 GGA3Q9NZ52 723 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 CD300AQ9UGN4 299 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 CDC23Q9UJX2 597 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 TLK1Q9UKI8 766 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 PSME2Q9UL46 239 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 PPM1HQ9ULR3 514 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 TMEM5Q9Y2B1 443 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 PCDHGB6Q9Y5F9 930 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 CAPN7Q9Y6W3 813 aa4.8□□□□□ -1.64
HMGB3P26-201ENST00000560051 TNIKQ9UKE5 1360 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 MYPNQ86TC9 1320 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 MAPK8IP3Q9UPT6 1336 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 GOLGA6L7A0A1B0GV03 622 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 CCDC162PA2VCL2 907 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 WDR91A4D1P6 747 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 GPR89AB7ZAQ6 455 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 GCOM1H8Y6P7 765 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 IGF2BP3O00425 579 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 PRRG2O14669 202 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 DAPK3O43293 454 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 AP1G1O43747 822 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 IDH3BO43837 385 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZNF862O60290 1169 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 GRIN3BO60391 1043 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 CIDEAO60543 219 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 ZNF189O75820 626 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 ATP5BP06576 529 aaKnown RBP4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 SNRNP70P08621 437 aaKnown RBP4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 SNRPA1P09661 255 aaKnown RBP4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 TMEM253P0C7T8 217 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 MYZAPP0CAP1 466 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 GPR89BP0CG08 455 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 PDHBP11177 359 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 PCNAP12004 261 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 HPGDP15428 266 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 SYN1P17600 705 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 POLR2EP19388 210 aaKnown RBP4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 SP100P23497 879 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 CHMP24386 653 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 GDI1P31150 447 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 PPM1AP35813 382 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 STAT5AP42229 794 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 SLC8A3P57103 927 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 UBE2IP63279 158 aaKnown RBP4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 CDK17Q00537 523 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 RALGDSQ12967 914 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 MPP2Q14168 576 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 LLGL1Q15334 1064 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 CCDC57Q2TAC2 916 aa4.79□□□□□ -1.64
HMGB3P26-201ENST00000560051 SKOR2Q2VWA4 1001 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms