RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 TSG101Q99816 390 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SH2D3AQ9BRG2 576 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 HERPUD2Q9BSE4 406 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 FTHL17Q9BXU8 183 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 NUCKS1Q9H1E3 243 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 PDZD7Q9H5P4 517 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ELAC1Q9H777 363 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SUGCTQ9HAC7 445 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 C1orf112Q9NSG2 853 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 LIMA1Q9UHB6 759 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 DNAI1Q9UI46 699 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 AKT3Q9Y243 479 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 DERAQ9Y315 318 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 NFE2L3Q9Y4A8 694 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 LRRIQ4A6NIV6 560 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 CCDC169A6NNP5 214 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 NCK2O43639 380 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 EXTL3O43909 919 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 PRPF6O94906 941 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 TIMP1P01033 207 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 NR3C1P04150 777 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 TPM3P06753 285 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 CCDC159P0C7I6 412 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 CCDC172P0C7W6 258 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SKIP12755 728 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ADSSP30520 456 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 GRM5P41594 1212 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 NEK2P51955 445 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 PRSS12P56730 875 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 FKBP3Q00688 224 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SLC7A5Q01650 507 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 APBA1Q02410 837 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SPAG1Q07617 926 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SRSF1Q07955 248 aaKnown RBP eCLIP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 KCNH2Q12809 1159 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 PRPF4BQ13523 1007 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ERCC6LQ2NKX8 1250 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ZC2HC1CQ53FD0 456 aaPredicted RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ZNF618Q5T7W0 954 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 TOGARAM2Q6ZUX3 1019 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 HFE2Q6ZVN8 426 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 HS2ST1Q7LGA3 356 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 APTXQ7Z2E3 356 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 DAAM2Q86T65 1068 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 IRF2BP1Q8IU81 584 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 KSR1Q8IVT5 923 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 FAM114A1Q8IWE2 563 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 CD302Q8IX05 232 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 TMEM40Q8WWA1 233 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ZBTB10Q96DT7 871 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ZMAT2Q96NC0 199 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 NECAB3Q96P71 396 aaPredicted RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 HAPLN2Q9GZV7 340 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 WNT8AQ9H1J5 351 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 PLCB1Q9NQ66 1216 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 RGS18Q9NS28 235 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 RXFP3Q9NSD7 469 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SIRPGQ9P1W8 387 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 TFR2Q9UP52 801 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 CTNND2Q9UQB3 1225 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 NOC2LQ9Y3T9 749 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 DGKBQ9Y6T7 804 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 FAM170AA1A519 330 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 TRIM64A6NGJ6 449 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 TRIM64BA6NI03 449 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ANKRD63C9JTQ0 380 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ARHGAP33O14559 1287 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 OGTO15294 1046 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 EFCAB14O75071 495 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SLC4A1P02730 911 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SRGAP2CP0DJJ0 459 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ATF7P17544 494 aaPredicted RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ARF4P18085 180 aaPredicted RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 GTF2H1P32780 548 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 THPOP40225 353 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 PMS1P54277 932 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 LSM11P83369 360 aaKnown RBP eCLIP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SHHQ15465 462 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SURF1Q15526 300 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 FAM47CQ5HY64 1035 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ATF7IP2Q5U623 682 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 MFSD5Q6N075 450 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 NOTUMQ6P988 496 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SLC27A1Q6PCB7 646 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 CRELD2Q6UXH1 353 aaPredicted RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ALKAL1Q6UXT8 129 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 GALNT5Q7Z7M9 940 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ZNF598Q86UK7 904 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SPATA18Q8TC71 538 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 NLRP4Q96MN2 994 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ZBED2Q9BTP6 218 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 KIFC3Q9BVG8 833 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 SRRTQ9BXP5 876 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 FAM49AQ9H0Q0 323 aaPredicted RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 CDT1Q9H211 546 aa4.36□□□□□ -1.71
ZEB1-212ENST00000558655 CPSF3Q9UKF6 684 aaKnown RBP4.36□□□□□ -1.71
ZEB1-212ENST00000558655 ATG2AQ2TAZ0 1938 aa4.35□□□□□ -1.71
ZEB1-212ENST00000558655 MUC6Q6W4X9 2439 aa4.35□□□□□ -1.71
ZEB1-212ENST00000558655 PATJQ8NI35 1801 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms