RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 XRCC6P12956 609 aaKnown RBP eCLIP6.2□□□□□ -1.42
SYNE2-210ENST00000553455 HOXA5P20719 270 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 CHKAP35790 457 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 GCLCP48506 637 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-210ENST00000553455 LILRA4P59901 499 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 JAG1P78504 1218 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 FAM189BP81408 668 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 ICA1Q05084 483 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 GALNT1Q10472 559 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-210ENST00000553455 CRHR2Q13324 411 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 CNGB1Q14028 1251 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-210ENST00000553455 NPY5RQ15761 445 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 B3GNTL1Q67FW5 361 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-210ENST00000553455 SPATA31D4Q6ZUB0 917 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 KRT28Q7Z3Y7 464 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 ANKRD42Q8N9B4 389 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 ZNF527Q8NB42 609 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 IPCEF1Q8WWN9 437 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-210ENST00000553455 MOGAT1Q96PD6 335 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 PPP1R9BQ96SB3 815 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 ADOQ96SZ5 270 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 DHX36Q9H2U1 1008 aaKnown RBP6.2□□□□□ -1.42
SYNE2-210ENST00000553455 TRPM5Q9NZQ8 1165 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 SLC39A10Q9ULF5 831 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 CAPN11Q9UMQ6 739 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 RAD54BQ9Y620 910 aa6.2□□□□□ -1.42
SYNE2-210ENST00000553455 MORC2Q9Y6X9 1032 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-210ENST00000553455 E7ENX8 843 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 RAB27BO00194 218 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 FFAR2O15552 330 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 CCP110O43303 1012 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 KCNQ3O43525 872 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 SCAF4O95104 1147 aaKnown RBP6.19□□□□□ -1.42
SYNE2-210ENST00000553455 CFIP05156 583 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 ACRV1P26436 265 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 LOXL3P58215 753 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 TAP2Q03519 686 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 TOB2Q14106 344 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-210ENST00000553455 SLC29A2Q14542 456 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 TMEM95Q3KNT9 176 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 HS1BP3Q53T59 392 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 PGBD2Q6P3X8 592 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 GLIS1Q8NBF1 620 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 ZNF384Q8TF68 577 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 BDH2Q9BUT1 245 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 EIF2AQ9BY44 585 aaKnown RBP6.19□□□□□ -1.42
SYNE2-210ENST00000553455 ZNF768Q9H5H4 540 aaKnown RBP6.19□□□□□ -1.42
SYNE2-210ENST00000553455 DNMT3BQ9UBC3 853 aaKnown RBP6.19□□□□□ -1.42
SYNE2-210ENST00000553455 ST6GALNAC2Q9UJ37 374 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 KCNE5Q9UJ90 142 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 MAGED2Q9UNF1 606 aaPredicted RBP6.19□□□□□ -1.42
SYNE2-210ENST00000553455 SHOC2Q9UQ13 582 aa6.19□□□□□ -1.42
SYNE2-210ENST00000553455 A0A1W2PS29 197 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 GOLGA6L3A6NEY3 463 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 HNRNPDLO14979 420 aaKnown RBP6.18□□□□□ -1.42
SYNE2-210ENST00000553455 SELENOPP49908 381 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 CPT1AP50416 773 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 ANXA11P50995 505 aaKnown RBP6.18□□□□□ -1.42
SYNE2-210ENST00000553455 BLMHQ13867 455 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 ARHGEF7Q14155 803 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 R3HDM1Q15032 1099 aaKnown RBP6.18□□□□□ -1.42
SYNE2-210ENST00000553455 ELF2Q15723 593 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 RABL3Q5HYI8 236 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 PLAG1Q6DJT9 500 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 TLDC1Q6P9B6 456 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 KCTD20Q7Z5Y7 419 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 TMEM132CQ8N3T6 1108 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 MYRIPQ8NFW9 859 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 CPT1CQ8TCG5 803 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 MUL1Q969V5 352 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 NACC2Q96BF6 587 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 C20orf173Q96LM9 149 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 NELL2Q99435 816 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 MAGEB5Q9BZ81 275 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 HEYLQ9NQ87 328 aaPredicted RBP6.18□□□□□ -1.42
SYNE2-210ENST00000553455 TM7SF3Q9NS93 570 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 RGL1Q9NZL6 768 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 DKK4Q9UBT3 224 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 FPGT-TNNI3KV9GXZ4 949 aa6.18□□□□□ -1.42
SYNE2-210ENST00000553455 PRAMEF33A0A0G2JMD5 474 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 PODXLO00592 558 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 TOR1BO14657 336 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 NPC1O15118 1278 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 RRP9O43818 475 aaKnown RBP6.17□□□□□ -1.42
SYNE2-210ENST00000553455 PRAMEF10O60809 474 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 SKAP2O75563 359 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-210ENST00000553455 CSTBP04080 98 aaKnown RBP6.17□□□□□ -1.42
SYNE2-210ENST00000553455 ZFP36P26651 326 aaKnown RBP6.17□□□□□ -1.42
SYNE2-210ENST00000553455 GRK6P43250 576 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 PTDSS1P48651 473 aaKnown RBP6.17□□□□□ -1.42
SYNE2-210ENST00000553455 PXNP49023 591 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-210ENST00000553455 COPAP53621 1224 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 CXADRP78310 365 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 RAB30Q15771 203 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 MGAT5BQ3V5L5 792 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 CCDC38Q502W7 563 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 ZNF585AQ6P3V2 769 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 GGT6Q6P531 493 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 FOXR2Q6PJQ5 311 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 TMEM108Q6UXF1 575 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms