RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 PCDHB18PQ96TA0 734 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 BTBD10Q9BSF8 475 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 FAM96AQ9H5X1 160 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 SAE1Q9UBE0 346 aaPredicted RBP10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 SSX2IPQ9Y2D8 614 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 LRCH1Q9Y2L9 728 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 IVNS1ABPQ9Y6Y0 642 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 DNAJC6O75061 913 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 ATP6V1B1P15313 513 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 GCLCP48506 637 aaPredicted RBP10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 VCPP55072 806 aaKnown RBP10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 DSG1Q02413 1049 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 ITKQ08881 620 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 THEMIS2Q5TEJ8 643 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 TTC39BQ5VTQ0 682 aaPredicted RBP10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 RNF43Q68DV7 783 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 TTC8Q8TAM2 541 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 PRMT6Q96LA8 375 aaPredicted RBP10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 TRPV6Q9H1D0 765 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 PFDN4Q9NQP4 134 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 PDP2Q9P2J9 529 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 CYP3A7-CYP3A51PA0A087WV96 503 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 KPNA7A9QM74 516 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 PAEPP09466 180 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 CYP3A7P24462 503 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 AP1B1Q10567 949 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 SHROOM1Q2M3G4 852 aaPredicted RBP10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 RARS2Q5T160 578 aaKnown RBP10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 ACAD11Q709F0 780 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 SLFN11Q7Z7L1 901 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 FAM71AQ8IYT1 594 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 ZCCHC9Q8N567 271 aaKnown RBP10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 CCDC33Q8N5R6 958 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 FLAD1Q8NFF5 587 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 TMC2Q8TDI7 906 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 AGAP3Q96P47 875 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 WDR18Q9BV38 432 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 RPAP3Q9H6T3 665 aaPredicted RBP10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 NALCNQ8IZF0 1738 aa10.69□□□□□ -0.7
SMARCC2-209ENST00000550164 LMO7Q8WWI1 1683 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 BANF1O75531 89 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 SNUPNO95149 360 aaKnown RBP10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 SETSIPP0DME0 302 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 ENO3P13929 434 aaPredicted RBP10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 MUTP22033 750 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 PEX5P50542 639 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 STX1BP61266 288 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 SLC34A1Q06495 639 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 BMT2Q1RMZ1 405 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 JADE1Q6IE81 842 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 ABRAQ8N0Z2 381 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 GALNT4Q8N4A0 578 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 HIC2Q96JB3 615 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 CLMNQ96JQ2 1002 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 HSD17B14Q9BPX1 270 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 TMEM39BQ9GZU3 492 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 LRRC4Q9HBW1 653 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 STK32BQ9NY57 414 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 SHOC2Q9UQ13 582 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 STARD13Q9Y3M8 1113 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 RPTORQ8N122 1335 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 RGPD2P0DJD1 1756 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 MED1Q15648 1581 aaPredicted RBP10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 CCDC78A2IDD5 438 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 FSCN2O14926 492 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 ADRB2P07550 413 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 DEUP1Q05D60 604 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 BNIP1Q12981 228 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 RIPK1Q13546 671 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 SGSM1Q2NKQ1 1148 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 LRRC74BQ6ZQY2 392 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 ECHDC2Q86YB7 292 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 CDKL3Q8IVW4 592 aaPredicted RBP10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 ZDHHC15Q96MV8 337 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 NIF3L1Q9GZT8 377 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 SNX25Q9H3E2 840 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 RSAD1Q9HA92 442 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 GTSE1Q9NYZ3 720 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 PAK5Q9P286 719 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 FBXO40Q9UH90 709 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 MID2Q9UJV3 735 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 AGAP1Q9UPQ3 857 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 R3HDM2Q9Y2K5 976 aaKnown RBP10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 DISP2A7MBM2 1401 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 C5orf60A6NFR6 353 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 ATP4AP20648 1035 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 CHRNA5P30532 468 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 ELK3P41970 407 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 JAM2P57087 298 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 UBA3Q8TBC4 463 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 MAGEC3Q8TD91 643 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 SHC3Q92529 594 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 INPP5DQ92835 1189 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 ANKRD27Q96NW4 1050 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 PCDH9Q9HC56 1237 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 GRHL1Q9NZI5 618 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 TMEM59LQ9UK28 342 aa10.68□□□□□ -0.7
SMARCC2-209ENST00000550164 SPATA31A5Q5VU36 1347 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms