RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 KINO60870 393 aaKnown RBP10.04□□□□□ -0.8
YBX3-218ENST00000546298 DLATP10515 647 aaKnown RBP10.04□□□□□ -0.8
YBX3-218ENST00000546298 TNNI1P19237 187 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 HOXD13P35453 343 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 AVPR1AP37288 418 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 CSTF1Q05048 431 aaKnown RBP10.04□□□□□ -0.8
YBX3-218ENST00000546298 EHHADHQ08426 723 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 TRPC3Q13507 836 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 LRRC32Q14392 662 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 PSMD6Q15008 389 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 KNOP1Q1ED39 458 aaKnown RBP10.04□□□□□ -0.8
YBX3-218ENST00000546298 BMT2Q1RMZ1 405 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 SOWAHAQ2M3V2 549 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 STXBP5Q5T5C0 1151 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 LMBRD2Q68DH5 695 aaPredicted RBP10.04□□□□□ -0.8
YBX3-218ENST00000546298 MAMSTRQ6ZN01 415 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 C4orf50Q6ZRC1 276 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 TRAPPC11Q7Z392 1133 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 NELFCDQ8IXH7 590 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 RDH13Q8NBN7 331 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 SPRYD3Q8NCJ5 442 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 OR5B17Q8NGF7 314 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 BPIFB1Q8TDL5 484 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 SCFD1Q8WVM8 642 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 FUBP3Q96I24 572 aaKnown RBP eCLIP10.04□□□□□ -0.8
YBX3-218ENST00000546298 MMS19Q96T76 1030 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 FAM126AQ9BYI3 521 aaPredicted RBP10.04□□□□□ -0.8
YBX3-218ENST00000546298 BLZF1Q9H2G9 400 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 CHRDQ9H2X0 955 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 IL21Q9HBE4 155 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 SLC39A2Q9NP94 309 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 TMLHEQ9NVH6 421 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 SIX4Q9UIU6 781 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 GTF3C4Q9UKN8 822 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 CDH9Q9ULB4 789 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 NDRG2Q9UN36 371 aaKnown RBP10.04□□□□□ -0.8
YBX3-218ENST00000546298 PCDHGA2Q9Y5H1 932 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 ATP6V1DQ9Y5K8 247 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 R4GN57 208 aa10.04□□□□□ -0.8
YBX3-218ENST00000546298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.03□□□□□ -0.8
YBX3-218ENST00000546298 ARNTLO00327 626 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 CLIC2O15247 247 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 EXOC3O60645 756 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 KIF20AO95235 890 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 F11P03951 625 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 MYL1P05976 194 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 HMGA1P17096 107 aaKnown RBP10.03□□□□□ -0.8
YBX3-218ENST00000546298 WARSP23381 471 aaKnown RBP10.03□□□□□ -0.8
YBX3-218ENST00000546298 CMA1P23946 247 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 ACAT1P24752 427 aaKnown RBP10.03□□□□□ -0.8
YBX3-218ENST00000546298 CCNE1P24864 410 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 MAGEA11P43364 429 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 CYP2J2P51589 502 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 CDR1P51861 262 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 AP3M2P53677 418 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 NLRP12P59046 1061 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 KRT85P78386 507 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 CYP4F8P98187 520 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 CYP24A1Q07973 514 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 PSMD2Q13200 908 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 FZD5Q13467 585 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 DDR2Q16832 855 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 CFAP221Q4G0U5 840 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 DGKKQ5KSL6 1271 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 LIMS2Q7Z4I7 341 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 MON1AQ86VX9 555 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 OSTM1Q86WC4 334 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 RALGPS2Q86X27 583 aaPredicted RBP10.03□□□□□ -0.8
YBX3-218ENST00000546298 GPIHBP1Q8IV16 184 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 SCN4BQ8IWT1 228 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 C12orf56Q8IXR9 622 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 KMT2EQ8IZD2 1858 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 CMTM8Q8IZV2 173 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 CCDC47Q96A33 483 aaKnown RBP10.03□□□□□ -0.8
YBX3-218ENST00000546298 CCDC127Q96BQ5 260 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 RSPRY1Q96DX4 576 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 SPATA32Q96LK8 384 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 CEP295NLQ96MC4 621 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 CGRRF1Q99675 332 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 SYT15Q9BQS2 421 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 MKNK1Q9BUB5 465 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 SLC46A2Q9BY10 475 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 SNX25Q9H3E2 840 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 KIF9Q9HAQ2 790 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 LMAN1LQ9HAT1 526 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 EXOC1Q9NV70 894 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 ZSCAN32Q9NX65 697 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 EHD2Q9NZN4 543 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 MAGEC2Q9UBF1 373 aaPredicted RBP10.03□□□□□ -0.8
YBX3-218ENST00000546298 SERTAD1Q9UHV2 236 aa10.03□□□□□ -0.8
YBX3-218ENST00000546298 MAGED2Q9UNF1 606 aaPredicted RBP10.03□□□□□ -0.8
YBX3-218ENST00000546298 CITO14578 2027 aa10.02□□□□□ -0.8
YBX3-218ENST00000546298 MYBPHLA2RUH7 354 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 SHISA7A6NL88 538 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 SLC38A8A6NNN8 435 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 PHACTR2O75167 634 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 NOL4O94818 638 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 CYP2F1P24903 491 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 ATICP31939 592 aa10.02□□□□□ -0.81
YBX3-218ENST00000546298 GNL1P36915 607 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms