RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SKIV2L2P42285 1042 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 MAGEA4P43358 317 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 NAMPTP43490 491 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 BACE1P56817 501 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 WDR4P57081 412 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 COPS2P61201 443 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF252P-AS1Q0IIN9 211 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 NFX1Q12986 1120 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 GRM1Q13255 1194 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 EMC2Q15006 297 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 MTFR1Q15390 333 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 EML3Q32P44 896 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 MAP7D1Q3KQU3 841 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 C2CD6Q53TS8 623 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 DAB2IPQ5VWQ8 1189 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 NUGGCQ68CJ6 796 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 LMBRD2Q68DH5 695 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 MIS18BP1Q6P0N0 1132 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 TLDC1Q6P9B6 456 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 PPP1R21Q6ZMI0 780 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ARHGEF18Q6ZSZ5 1173 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF365Q70YC5 407 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ASRGL1Q7L266 308 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 TRMT1LQ7Z2T5 733 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 PHLDB2Q86SQ0 1253 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 TRABD2AQ86V40 505 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 NIM1KQ8IY84 436 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ANKRD35Q8N283 1001 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ALLCQ8N6M5 410 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 NIPA2Q8N8Q9 360 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ANKLE1Q8NAG6 615 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 RBBP8NLQ8NC74 664 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ASAP3Q8TDY4 903 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 DYDC1Q8WWB3 177 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 NKD2Q969F2 451 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 KCTD12Q96CX2 325 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 BICD1Q96G01 975 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 RBM41Q96IZ5 413 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 SLITRK1Q96PX8 696 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 FNBP1Q96RU3 617 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 MYCBPQ99417 103 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 CCDC77Q9BR77 488 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 NIFKQ9BYG3 293 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 CCDC113Q9H0I3 377 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 RXFP1Q9HBX9 757 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 NOD2Q9HC29 1040 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 NMRK2Q9NPI5 230 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ARHGEF3Q9NR81 526 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 PARVAQ9NVD7 372 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 IP6K2Q9UHH9 426 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF112Q9UJU3 913 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF214Q9UL59 606 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 NUB1Q9Y5A7 615 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 PCDHB4Q9Y5E5 795 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 LCTP09848 1927 aa5.49□□□□□ -1.53
ATPAF1-212ENST00000542495 ANKRD33BA6NCL7 494 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 FAM47DPA6NHR8 397 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 ALOX15BO15296 676 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 FAM189A1O60320 539 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 ASMTLO95671 621 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 ASS1P00966 412 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 EDN1P05305 212 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 CCNB1P14635 433 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 CD58P19256 250 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 RDXP35241 583 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 MAP2K2P36507 400 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 CETN2P41208 172 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 ACOT2P49753 483 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 VPS41P49754 854 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 AP3M2P53677 418 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 KCNJ2P63252 427 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 NOP14P78316 857 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 MGAT5Q09328 741 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 FSTL1Q12841 308 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 STRN3Q13033 797 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 TNFAIP1Q13829 316 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 NEDD9Q14511 834 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 MORF4L2Q15014 288 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 TARBP2Q15633 366 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 OASLQ15646 514 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 OCLNQ16625 522 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 TAZQ16635 292 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 P3H1Q32P28 736 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 EAPPQ56P03 285 aaPredicted RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 FAM133BQ5BKY9 247 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 ZC3H12AQ5D1E8 599 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 ZBTB41Q5SVQ8 909 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 RNASEH2BQ5TBB1 312 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 TMEM270Q6UE05 265 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 SPOCD1Q6ZMY3 1216 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 Q6ZNB5 142 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 PASD1Q8IV76 773 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 SCUBE3Q8IX30 993 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 FITM2Q8N6M3 262 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 DNAJC5GQ8N7S2 189 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 ANKRD42Q8N9B4 389 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 GLIS1Q8NBF1 620 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 OR5B17Q8NGF7 314 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 MGARPQ8TDB4 240 aa5.48□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF606Q8WXB4 792 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms