RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 A8MXQ7 604 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 PRRG1O14668 218 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 MBTPS2O43462 519 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 ACAT1P24752 427 aaKnown RBP20.73■□□□□ 0.91
DDX55-207ENST00000540763 LMO2P25791 158 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 RAP1GAPP47736 663 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 CDH8P55286 799 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 GCNT1Q02742 428 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 PLD1Q13393 1074 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 CUL2Q13617 745 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 KRT31Q15323 416 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 CFAP221Q4G0U5 840 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 C4orf50Q6ZRC1 276 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 GPR149Q86SP6 731 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 LRRTM3Q86VH5 581 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.73■□□□□ 0.91
DDX55-207ENST00000540763 SUSD6Q92537 303 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 ELMO3Q96BJ8 720 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 FAM81BQ96LP2 452 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 NECTIN4Q96NY8 510 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 PRKD2Q9BZL6 878 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 CYP4F11Q9HBI6 524 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 LIMA1Q9UHB6 759 aaKnown RBP20.73■□□□□ 0.91
DDX55-207ENST00000540763 NME7Q9Y5B8 376 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 PCDHB5Q9Y5E4 795 aa20.73■□□□□ 0.91
DDX55-207ENST00000540763 XIRP2A4UGR9 3374 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 CCDC195A0A1B0GUA6 201 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 LRRC10BA6NIK2 292 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 BECN2A8MW95 431 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 XYLBO75191 536 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 CILPO75339 1184 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 SEC24AO95486 1093 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 WEE2P0C1S8 567 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 MTHFRP42898 656 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 TUFMP49411 452 aaKnown RBP20.72■□□□□ 0.91
DDX55-207ENST00000540763 EXOC3L4Q17RC7 722 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 RARS2Q5T160 578 aaKnown RBP20.72■□□□□ 0.91
DDX55-207ENST00000540763 TRIM65Q6PJ69 517 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 CRYBG2Q8N1P7 616 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 B3GALNT2Q8NCR0 500 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 MYCBPAPQ8TBZ2 947 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 TATDN2Q93075 761 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 JAKMIP2Q96AA8 810 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 ZNF707Q96C28 371 aaPredicted RBP20.72■□□□□ 0.91
DDX55-207ENST00000540763 RIPOR3Q96MK2 946 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 PGLYRP2Q96PD5 576 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 INTS2Q9H0H0 1204 aaKnown RBP20.72■□□□□ 0.91
DDX55-207ENST00000540763 CRTAC1Q9NQ79 661 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 GTF3C4Q9UKN8 822 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 GREB1Q4ZG55 1949 aa20.72■□□□□ 0.91
DDX55-207ENST00000540763 HCRTO43612 131 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 RFPL2O75678 378 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 LRG1P02750 347 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 PDGFRBP09619 1106 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 PTPN1P18031 435 aaKnown RBP20.71■□□□□ 0.91
DDX55-207ENST00000540763 NDST1P52848 882 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 SMAD2Q15796 467 aaKnown RBP20.71■□□□□ 0.91
DDX55-207ENST00000540763 LRSAM1Q6UWE0 723 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 ATAD1Q8NBU5 361 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 FAM200AQ8TCP9 573 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 NT5C1AQ9BXI3 368 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.71■□□□□ 0.911e-6■■■■■ 105.2
DDX55-207ENST00000540763 CISHQ9NSE2 258 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 TMLHEQ9NVH6 421 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 USP15Q9Y4E8 981 aaPredicted RBP20.71■□□□□ 0.91
DDX55-207ENST00000540763 YIPF1Q9Y548 306 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 MYH10P35580 1976 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 PATJQ8NI35 1801 aa20.71■□□□□ 0.91
DDX55-207ENST00000540763 MYBPHLA2RUH7 354 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 GRXCR2A6NFK2 248 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 CDK11BP21127 795 aaKnown RBP20.7■□□□□ 0.9
DDX55-207ENST00000540763 MAGEA11P43364 429 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 PSMC1P62191 440 aaKnown RBP20.7■□□□□ 0.9
DDX55-207ENST00000540763 DUSP4Q13115 394 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 CLUL1Q15846 466 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 ATAT1Q5SQI0 421 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 PTCRAQ6ISU1 281 aaPredicted RBP20.7■□□□□ 0.9
DDX55-207ENST00000540763 TMC5Q6UXY8 1006 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 ENOSF1Q7L5Y1 443 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 SPATA2LQ8IUW3 424 aaPredicted RBP20.7■□□□□ 0.9
DDX55-207ENST00000540763 PPM1KQ8N3J5 372 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 UBR7Q8N806 425 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 C12orf76Q8N812 135 aaPredicted RBP20.7■□□□□ 0.9
DDX55-207ENST00000540763 SMG7Q92540 1137 aaKnown RBP20.7■□□□□ 0.9
DDX55-207ENST00000540763 CEP295NLQ96MC4 621 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 ARID3AQ99856 593 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 C1QTNF1Q9BXJ1 281 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 CRISPLD1Q9H336 500 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 CBX8Q9HC52 389 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 ABI2Q9NYB9 513 aaPredicted RBP20.7■□□□□ 0.9
DDX55-207ENST00000540763 TAB2Q9NYJ8 693 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 NOTCH4Q99466 2003 aa20.7■□□□□ 0.9
DDX55-207ENST00000540763 ATP2C2O75185 946 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 HAPLN1P10915 354 aaPredicted RBP20.69■□□□□ 0.9
DDX55-207ENST00000540763 PON1P27169 355 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 COPB1P53618 953 aaKnown RBP20.69■□□□□ 0.9
DDX55-207ENST00000540763 ZNF445P59923 1031 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 TPM4P67936 248 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 CBX2Q14781 532 aaPredicted RBP20.69■□□□□ 0.9
DDX55-207ENST00000540763 VSTM1Q6UX27 236 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms