RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	NPY5R	Q15761	445 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	PLA1A	Q53H76	456 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	ALF	Q53S48	1182 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	TCTN3	Q6NUS6	607 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	KIAA0408	Q6ZU52	694 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	USP49	Q70CQ1	688 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	SYT8	Q8NBV8	401 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	TRAPPC12	Q8WVT3	735 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	MIEF2	Q96C03	454 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	LTV1	Q96GA3	475 aa	Predicted RBP	4.69	□□□□□ -1.66
RDX-208	ENST00000530085	PPP1R9B	Q96SB3	815 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	SMO	Q99835	787 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	TMEM120A	Q9BXJ8	343 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	MAGEH1	Q9H213	219 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	DHX36	Q9H2U1	1008 aa	Known RBP	4.69	□□□□□ -1.66
RDX-208	ENST00000530085	ZCCHC4	Q9H5U6	513 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	AS3MT	Q9HBK9	375 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	TMEM8A	Q9HCN3	771 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	USP40	Q9NVE5	1235 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	ETAA1	Q9NY74	926 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.69	□□□□□ -1.66
RDX-208	ENST00000530085	VSX1	Q9NZR4	365 aa	Predicted RBP	4.69	□□□□□ -1.66
RDX-208	ENST00000530085	PPP4R1L	Q9P1A2	415 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	LRFN1	Q9P244	771 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	IGSF9	Q9P2J2	1179 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	DKK4	Q9UBT3	224 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	SLC30A1	Q9Y6M5	507 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	DUSP10	Q9Y6W6	482 aa		4.69	□□□□□ -1.66
RDX-208	ENST00000530085	SYT5	O00445	386 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	DCLK1	O15075	740 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	CCP110	O43303	1012 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	TRIM13	O60858	407 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	RAD17	O75943	681 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	DHRS4L1	P0CG22	281 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	VEGFA	P15692	232 aa	Predicted RBP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	CPT1A	P50416	773 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	ZNF844	Q08AG5	666 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	FSTL1	Q12841	308 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	INSC	Q1MX18	579 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	TSHZ3	Q63HK5	1081 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	PLAG1	Q6DJT9	500 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	FCRL6	Q6DN72	434 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	USP17L6P	Q6QN14	398 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	SP8	Q8IXZ3	490 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	GSPT2	Q8IYD1	628 aa	Known RBP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	FUK	Q8N0W3	1084 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	ANKRD35	Q8N283	1001 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	D2HGDH	Q8N465	521 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	NSUN7	Q8NE18	718 aa	Known RBP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	POC1B	Q8TC44	478 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	IPO4	Q8TEX9	1081 aa	Known RBP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	GCC1	Q96CN9	775 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	LRIG1	Q96JA1	1093 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	SLC46A1	Q96NT5	459 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	TRIB1	Q96RU8	372 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	PNKP	Q96T60	521 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	SORBS1	Q9BX66	1292 aa	Known RBP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	REXO4	Q9GZR2	422 aa	Known RBP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	HEYL	Q9NQ87	328 aa	Predicted RBP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	SAGE1	Q9NXZ1	904 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	ANAPC4	Q9UJX5	808 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	ZFR2	Q9UPR6	939 aa	Known RBP	4.68	□□□□□ -1.66
RDX-208	ENST00000530085	ATP11B	Q9Y2G3	1177 aa		4.68	□□□□□ -1.66
RDX-208	ENST00000530085	NPEPPSL1	A6NEC2	478 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	AQP12B	A6NM10	295 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085		H7C4K7	107 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085		M0R3H8	397 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	LEFTY2	O00292	366 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	ACKR2	O00590	384 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	PIP5K1B	O14986	540 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	ATXN1L	P0C7T5	689 aa	Known RBP	4.67	□□□□□ -1.66
RDX-208	ENST00000530085	IDE	P14735	1019 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	TPH1	P17752	444 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	RABGGTB	P53611	331 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	NHLH2	Q02577	135 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	PRKG1	Q13976	671 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	NFIX	Q14938	502 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	MAPKAPK3	Q16644	382 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	AGAP9	Q5VTM2	703 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	C1QL3	Q5VWW1	255 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.67	□□□□□ -1.66
RDX-208	ENST00000530085	NAIF1	Q69YI7	327 aa	Predicted RBP	4.67	□□□□□ -1.66
RDX-208	ENST00000530085	TAF2	Q6P1X5	1199 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	SLC30A10	Q6XR72	485 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	KRT73	Q86Y46	540 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	ZNF280B	Q86YH2	543 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	ANKRD18A	Q8IVF6	992 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	RHOT2	Q8IXI1	618 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.67	□□□□□ -1.66
RDX-208	ENST00000530085	PAF1	Q8N7H5	531 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	MB21D1	Q8N884	522 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	CXorf38	Q8TB03	319 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	FAM71B	Q8TC56	605 aa		4.67	□□□□□ -1.66
RDX-208	ENST00000530085	ZNF483	Q8TF39	744 aa	Predicted RBP	4.67	□□□□□ -1.66
RDX-208	ENST00000530085	NEU1	Q99519	415 aa		4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms