RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 CAB39Q9Y376 341 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 CYP11B2P19099 503 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 EDRF1Q3B7T1 1238 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZBED8Q8IZ13 594 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 TAAR1Q96RJ0 339 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 RTFDC1Q9BY42 306 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 CAAP1Q9H8G2 361 aa12.79□□□□□ -0.36
PCDHGA6-201ENST00000517434 SLC2A3P11169 496 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 FGFR2P21802 821 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 NLRP11P59045 1033 aaKnown RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 RPL10AP62906 217 aaKnown RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 ANO4Q32M45 955 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 FAM102AQ5T9C2 384 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 NOP9Q86U38 636 aaKnown RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 TXNRD3Q86VQ6 643 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 CCDC103Q8IW40 242 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 PGBD3Q8N328 593 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 GALNT4Q8N4A0 578 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 TERB1Q8NA31 727 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 ASAP3Q8TDY4 903 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 ARL8AQ96BM9 186 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 GLIS2Q9BZE0 524 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 BRD8Q9H0E9 1235 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 PARVAQ9NVD7 372 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 GPRC5DQ9NZD1 345 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 FNDC3AQ9Y2H6 1198 aaKnown RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 SSU72P8A0A1W2PR75 194 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 HLA-DPA1P20036 260 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 FAM117BQ6P1L5 589 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 C11orf70Q9BRQ4 267 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 HEMGNQ9BXL5 484 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 GTSE1Q9NYZ3 720 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 HSPBP1Q9NZL4 362 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 EMSYQ7Z589 1322 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 WNT10BO00744 389 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZC3H12BQ5HYM0 836 aaKnown RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 RGMBQ6NW40 437 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 METTL7BQ6UX53 244 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 DDX42Q86XP3 938 aaKnown RBP eCLIP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 NT5C1AQ9BXI3 368 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 MRPL9Q9BYD2 267 aaKnown RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 FOXP3Q9BZS1 431 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 BFARQ9NZS9 450 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 DBR1Q9UK59 544 aaKnown RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 TTC7AQ9ULT0 858 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 FKTNO75072 461 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 IRGCQ6NXR0 463 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 C16orf89Q6UX73 402 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 NR1H4Q96RI1 486 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 C7orf25Q9BPX7 421 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 AURKCQ9UQB9 309 aa12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 ARIH1Q9Y4X5 557 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA6-201ENST00000517434 PI4K2BG5E9Z4 385 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 CYP2C8P10632 490 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 BCAR1P56945 870 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 GTF2H3Q13889 308 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 NR1I3Q14994 352 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 MFSD4BQ5TF39 518 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 OLFML1Q6UWY5 402 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 RIBC1Q8N443 379 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 OSBPL8Q9BZF1 889 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 TRPC7Q9HCX4 862 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 TUBA8Q9NY65 449 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 IPPQ9Y573 584 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 TMEM247A6NEH6 219 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 NFIBO00712 420 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 PECAM1P16284 738 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 IFNA8P32881 189 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 EIF2B2P49770 351 aaKnown RBP12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 ADARP55265 1226 aaKnown RBP12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 DACT2Q5SW24 774 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 WLSQ5T9L3 541 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 HEATR6Q6AI08 1181 aaKnown RBP12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 FAM81AQ8TBF8 368 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 MRPS31Q92665 395 aaKnown RBP12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 C18orf8Q96DM3 657 aa12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZNF668Q96K58 619 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA6-201ENST00000517434 RAD51CO43502 376 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 ATP9AO75110 1047 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 ITIH2P19823 946 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 CLK1P49759 484 aaKnown RBP12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 FXR1P51114 621 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 YWHAHQ04917 246 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 GPS1Q13098 491 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 NCOA4Q13772 614 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 IQSEC1Q6DN90 963 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 RHOT1Q8IXI2 618 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 ZNF555Q8NEP9 628 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 MS4A14Q96JA4 679 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 PLEKHA5Q9HAU0 1116 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 EPB41L4AQ9HCS5 686 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 TPD52L2O43399 206 aaKnown RBP12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 VIL1P09327 827 aaKnown RBP12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 RUNX1T1Q06455 604 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 DRAP1Q14919 205 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 LONRF1Q17RB8 773 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 MGAT5BQ3V5L5 792 aa12.77□□□□□ -0.37
PCDHGA6-201ENST00000517434 ACER1Q8TDN7 264 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 266.1 ms