RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 CLDND1Q9NY35 253 aa15.41■□□□□ 0.06
USP11-212ENST00000497179 MYBPHLA2RUH7 354 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 TEX33O43247 280 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 SPATA31D3P0C874 917 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 PTPN1P18031 435 aaKnown RBP15.4■□□□□ 0.06
USP11-212ENST00000497179 RFX1P22670 979 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 LTBRP36941 435 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 MFAP3P55082 362 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 ADCY1Q08828 1119 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 MAPRE1Q15691 268 aaKnown RBP15.4■□□□□ 0.06
USP11-212ENST00000497179 LIN9Q5TKA1 542 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 KLHDC7AQ5VTJ3 777 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 GJB7Q6PEY0 223 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 SPATA31D4Q6ZUB0 917 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 RTL10Q7L3V2 364 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 GAS2L3Q86XJ1 694 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 CRYBG2Q8N1P7 616 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 SPPL2BQ8TCT7 592 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 MYLPFQ96A32 169 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 PGLYRP2Q96PD5 576 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 DNAI2Q9GZS0 605 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 RBSNQ9H1K0 784 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 GANQ9H2C0 597 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 CLEC1BQ9P126 229 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 HSFX1Q9UBD0 423 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 AJAP1Q9UKB5 411 aaPredicted RBP15.4■□□□□ 0.06
USP11-212ENST00000497179 GTF3C4Q9UKN8 822 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 PCDHB5Q9Y5E4 795 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 XIRP2A4UGR9 3374 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 PRUNE2Q8WUY3 3088 aa15.4■□□□□ 0.06
USP11-212ENST00000497179 COL6A3P12111 3177 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 A0A1W2PQC6 194 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 PAPLNO95428 1278 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 SEC24AO95486 1093 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 C8AP07357 584 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 TRIM21P19474 475 aaKnown RBP15.39■□□□□ 0.05
USP11-212ENST00000497179 KLK7P49862 253 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 ZNF132P52740 706 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 RAD23BP54727 409 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 ORC1Q13415 861 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 NR1I3Q14994 352 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 SKIV2LQ15477 1246 aaKnown RBP15.39■□□□□ 0.05
USP11-212ENST00000497179 CFAP221Q4G0U5 840 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 MDH1BQ5I0G3 518 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 IQCEQ6IPM2 695 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 ANKRD54Q6NXT1 300 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 C4orf50Q6ZRC1 276 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 CCDC149Q6ZUS6 474 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 ACOT1Q86TX2 421 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 SLC4A11Q8NBS3 891 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 ATAD1Q8NBU5 361 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 CMASQ8NFW8 434 aaPredicted RBP15.39■□□□□ 0.05
USP11-212ENST00000497179 FUBP3Q96I24 572 aaKnown RBP eCLIP15.39■□□□□ 0.05
USP11-212ENST00000497179 LPIN3Q9BQK8 851 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 NAA15Q9BXJ9 866 aaKnown RBP15.39■□□□□ 0.05
USP11-212ENST00000497179 CRISPLD1Q9H336 500 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 UBE2ZQ9H832 354 aaPredicted RBP15.39■□□□□ 0.05
USP11-212ENST00000497179 SFXN1Q9H9B4 322 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 ABCB6Q9NP58 842 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 ZDHHC7Q9NXF8 308 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 DNAJC12Q9UKB3 198 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 CNTN6Q9UQ52 1028 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 DAAM1Q9Y4D1 1078 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 FHOD1Q9Y613 1164 aa15.39■□□□□ 0.05
USP11-212ENST00000497179 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.38■□□□□ 0.05
USP11-212ENST00000497179 PRRG1O14668 218 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 ZMYND10O75800 440 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 NOL4O94818 638 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 UCHL3P15374 230 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 HOXB8P17481 243 aaPredicted RBP15.38■□□□□ 0.05
USP11-212ENST00000497179 HOXA9P31269 272 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 ELF1P32519 619 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 MAGEA11P43364 429 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 UBASH3AP57075 661 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 DLX2Q07687 328 aaPredicted RBP15.38■□□□□ 0.05
USP11-212ENST00000497179 DUSP4Q13115 394 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 UVSSAQ2YD98 709 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 SYCE2Q6PIF2 218 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 SPATA2LQ8IUW3 424 aaPredicted RBP15.38■□□□□ 0.05
USP11-212ENST00000497179 SLC7A14Q8TBB6 771 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 SHC3Q92529 594 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 PCED1BQ96HM7 432 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 TMEM176AQ96HP8 235 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 MSLNLQ96KJ4 702 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 CYP4F11Q9HBI6 524 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 FAM207AQ9NSI2 230 aaPredicted RBP15.38■□□□□ 0.05
USP11-212ENST00000497179 ABI2Q9NYB9 513 aaPredicted RBP15.38■□□□□ 0.05
USP11-212ENST00000497179 IFNKQ9P0W0 207 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 COG5Q9UP83 839 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 YIPF1Q9Y548 306 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 PCDHB4Q9Y5E5 795 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 INSL5Q9Y5Q6 135 aa15.38■□□□□ 0.05
USP11-212ENST00000497179 MTCL1Q9Y4B5 1905 aaKnown RBP15.37■□□□□ 0.05
USP11-212ENST00000497179 EPHB6O15197 1021 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 POU2F2P09086 479 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 PAEPP09466 180 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 HNRNPA1P09651 372 aaKnown RBP eCLIP15.37■□□□□ 0.05
USP11-212ENST00000497179 HAPLN1P10915 354 aaPredicted RBP15.37■□□□□ 0.05
USP11-212ENST00000497179 CYP27A1Q02318 531 aa15.37■□□□□ 0.05
USP11-212ENST00000497179 ARHGAP44Q17R89 818 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms