RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 NPHP1O15259 732 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 ERN1O75460 977 aaKnown RBP6.46□□□□□ -1.38
SSR3-208ENST00000496050 HLA-DOAP06340 250 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 ACVR2AP27037 513 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 GCLCP48506 637 aaPredicted RBP6.46□□□□□ -1.38
SSR3-208ENST00000496050 PXNP49023 591 aaPredicted RBP6.46□□□□□ -1.38
SSR3-208ENST00000496050 CPT1AP50416 773 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 CRHR2Q13324 411 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 NPY5RQ15761 445 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 PFKFB4Q16877 469 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 TAF2Q6P1X5 1199 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 USP17L6PQ6QN14 398 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 Q6ZRM9 215 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 KRT73Q86Y46 540 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 PSD4Q8NDX1 1056 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 EDAQ92838 391 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 GDF15Q99988 308 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 PAGR1Q9BTK6 254 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 FAM83DQ9H4H8 585 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 HEYLQ9NQ87 328 aaPredicted RBP6.46□□□□□ -1.38
SSR3-208ENST00000496050 NECTIN3Q9NQS3 549 aa6.46□□□□□ -1.38
SSR3-208ENST00000496050 MRPS18AQ9NVS2 196 aaKnown RBP6.46□□□□□ -1.38
SSR3-208ENST00000496050 MTO1Q9Y2Z2 717 aaKnown RBP6.46□□□□□ -1.38
SSR3-208ENST00000496050 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.46□□□□□ -1.38
SSR3-208ENST00000496050 CCDC189A1A4V9 331 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 PODXLO00592 558 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 DCLK1O15075 740 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 KCNA2P16389 499 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 ITGALP20701 1170 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 FGFR4P22455 802 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 CCT5P48643 541 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 SCNN1GP51170 649 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 KRT17Q04695 432 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 FSTL1Q12841 308 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 BOP1Q14137 746 aaKnown RBP6.45□□□□□ -1.38
SSR3-208ENST00000496050 TUBB8Q3ZCM7 444 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 ZACNQ401N2 412 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 PLAG1Q6DJT9 500 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 LCNL1Q6ZST4 164 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 CLNKQ7Z7G1 428 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 MAPKAPK5Q8IW41 473 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 MYCT1Q8N699 235 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 LRIG1Q96JA1 1093 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 NELL2Q99435 816 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 NEU1Q99519 415 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 MYLK2Q9H1R3 596 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 DEF6Q9H4E7 631 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 TRPM5Q9NZQ8 1165 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 LUZP4Q9P127 313 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 HSFX1Q9UBD0 423 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 SPATA31A3Q5VYP0 1347 aa6.45□□□□□ -1.38
SSR3-208ENST00000496050 AATKQ6ZMQ8 1374 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 FAM234BA2RU67 622 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 AQP7P3A6NL99 342 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 H7C4K7 107 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 TOR1BO14657 336 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 TRIM24O15164 1050 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 ZNF185O15231 689 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 KCNQ3O43525 872 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 TLR5O60602 858 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 RPS6KA4O75676 772 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 SCAF4O95104 1147 aaKnown RBP6.44□□□□□ -1.38
SSR3-208ENST00000496050 NDST3O95803 873 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 FGAP02671 866 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 ITGB3P05106 788 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 PTDSS1P48651 473 aaKnown RBP6.44□□□□□ -1.38
SSR3-208ENST00000496050 TOB1P50616 345 aaPredicted RBP6.44□□□□□ -1.38
SSR3-208ENST00000496050 LOXL3P58215 753 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 HSD11B2P80365 405 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 FPGSQ05932 587 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 RRP1BQ14684 758 aaKnown RBP6.44□□□□□ -1.38
SSR3-208ENST00000496050 RAB30Q15771 203 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 SPDYE7PQ495Y7 208 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 PDCD4Q53EL6 469 aaKnown RBP6.44□□□□□ -1.38
SSR3-208ENST00000496050 ARL6IP4Q66PJ3 421 aaKnown RBP6.44□□□□□ -1.38
SSR3-208ENST00000496050 GDF7Q7Z4P5 450 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 GLIS1Q8NBF1 620 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 ZNF483Q8TF39 744 aaPredicted RBP6.44□□□□□ -1.38
SSR3-208ENST00000496050 PPP2R3CQ969Q6 453 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 RBM15Q96T37 977 aaKnown RBP eCLIP6.44□□□□□ -1.38
SSR3-208ENST00000496050 PTDSS2Q9BVG9 487 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.44□□□□□ -1.38
SSR3-208ENST00000496050 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.44□□□□□ -1.38
SSR3-208ENST00000496050 OBP2BQ9NPH6 170 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 RGL1Q9NZL6 768 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 VSX1Q9NZR4 365 aaPredicted RBP6.44□□□□□ -1.38
SSR3-208ENST00000496050 CTTNBP2NLQ9P2B4 639 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 DKK4Q9UBT3 224 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 SORCS3Q9UPU3 1222 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 TBC1D30Q9Y2I9 924 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 FPGT-TNNI3KV9GXZ4 949 aa6.44□□□□□ -1.38
SSR3-208ENST00000496050 RGS10O43665 173 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 COQ9O75208 318 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 SUN1O94901 812 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 CHRM3P20309 590 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 GABRB3P28472 473 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 PDIA3P30101 505 aaKnown RBP6.43□□□□□ -1.38
SSR3-208ENST00000496050 ANXA11P50995 505 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms