RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ARSHQ5FYA8 562 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 TXNDC8Q6A555 127 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 ADALQ6DHV7 355 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 RASSF8Q8NHQ8 419 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 KCNN1Q92952 543 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 C2CD2Q9Y426 696 aa15.38■□□□□ 0.05
VARS-228ENST00000495010 OTOL1A6NHN0 477 aaPredicted RBP15.37■□□□□ 0.05
VARS-228ENST00000495010 TBCAO75347 108 aaKnown RBP15.37■□□□□ 0.05
VARS-228ENST00000495010 PRPF40AO75400 957 aaKnown RBP15.37■□□□□ 0.05
VARS-228ENST00000495010 APBB3O95704 486 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 F11P03951 625 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 ARSAP15289 507 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 GBP1P32455 592 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 DAB2IPQ5VWQ8 1189 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 WSCD1Q658N2 575 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 SLFN12LQ6IEE8 588 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 PSAPL1Q6NUJ1 521 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 LRRTM3Q86VH5 581 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 MON1AQ86VX9 555 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 RPLP0P6Q8NHW5 317 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 ACDQ96AP0 544 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 PI4K2AQ9BTU6 479 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 EDEM2Q9BV94 578 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 DUSP15Q9H1R2 295 aaPredicted RBP15.37■□□□□ 0.05
VARS-228ENST00000495010 TRPC7Q9HCX4 862 aa15.37■□□□□ 0.05
VARS-228ENST00000495010 UXTQ9UBK9 157 aaPredicted RBP15.37■□□□□ 0.05
VARS-228ENST00000495010 SPAG17Q6Q759 2223 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 SDK1Q7Z5N4 2213 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 KPNA7A9QM74 516 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 SLC26A4O43511 780 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 CAVIN2O95810 425 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 GJA4P35212 333 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 UBA7P41226 1012 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 IFNAR2P48551 515 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 NOVA1P51513 510 aaKnown RBP15.36■□□□□ 0.05
VARS-228ENST00000495010 DGKEP52429 567 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 NR1H3Q13133 447 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 DMC1Q14565 340 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 ZNF268Q14587 947 aaPredicted RBP15.36■□□□□ 0.05
VARS-228ENST00000495010 NFE2Q16621 373 aaPredicted RBP15.36■□□□□ 0.05
VARS-228ENST00000495010 ARL6IP4Q66PJ3 421 aaKnown RBP15.36■□□□□ 0.05
VARS-228ENST00000495010 TCEAL6Q6IPX3 200 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 SYT13Q7L8C5 426 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 TMEM150AQ86TG1 271 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 CCDC26Q8TAB7 109 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 CD101Q93033 1021 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 TCEAL3Q969E4 200 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 CHFRQ96EP1 664 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 AK8Q96MA6 479 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 ZNF560Q96MR9 790 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 ECT2Q9H8V3 914 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 POLR3BQ9NW08 1133 aaPredicted RBP15.36■□□□□ 0.05
VARS-228ENST00000495010 DUS2Q9NX74 493 aaKnown RBP15.36■□□□□ 0.05
VARS-228ENST00000495010 AGO2Q9UKV8 859 aaKnown RBP15.36■□□□□ 0.05
VARS-228ENST00000495010 CHD8Q9HCK8 2581 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 TSC2P49815 1807 aa15.36■□□□□ 0.05
VARS-228ENST00000495010 ZNF638Q14966 1978 aaKnown RBP15.35■□□□□ 0.05
VARS-228ENST00000495010 C4orf47A7E2U8 309 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 DCLK1O15075 740 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 PROS1P07225 676 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 USP17L7P0C7H9 530 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 HMGA1P17096 107 aaKnown RBP15.35■□□□□ 0.05
VARS-228ENST00000495010 PNPLA4P41247 253 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 RPL10AP62906 217 aaKnown RBP15.35■□□□□ 0.05
VARS-228ENST00000495010 GTF2BQ00403 316 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 MTF1Q14872 753 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 SLC39A4Q6P5W5 647 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 C11orf74Q86VG3 221 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 ATP2A3Q93084 1043 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 CCSER1Q9C0I3 900 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 FBRSL1Q9HCM7 1045 aaKnown RBP15.35■□□□□ 0.05
VARS-228ENST00000495010 EBF1Q9UH73 591 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 ANK1P16157 1881 aa15.35■□□□□ 0.05
VARS-228ENST00000495010 TRAV19A0A0A6YYK7 116 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 BCLAF3A2AJT9 711 aaKnown RBP15.34■□□□□ 0.05
VARS-228ENST00000495010 ANKRD63C9JTQ0 380 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 H3BQV1 296 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 IL18RAPO95256 599 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 CKMP06732 381 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 GPR15P49685 360 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 ZNF131P52739 623 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 MYL7Q01449 175 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 FAM160A1Q05DH4 1040 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 USP39Q53GS9 565 aaKnown RBP15.34■□□□□ 0.05
VARS-228ENST00000495010 SDHAF4Q5VUM1 108 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 FSIP1Q8NA03 581 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 STKLD1Q8NE28 680 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 TSTD1Q8NFU3 115 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 OSCP1Q8WVF1 389 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 POMGNT1Q8WZA1 660 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 TCHHQ07283 1943 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 ATG2BQ96BY7 2078 aa15.34■□□□□ 0.05
VARS-228ENST00000495010 CNOT1A5YKK6 2376 aaKnown RBP15.33■□□□□ 0.04
VARS-228ENST00000495010 KHNYNO15037 678 aaKnown RBP15.33■□□□□ 0.04
VARS-228ENST00000495010 HUS1O60921 280 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 SEC24BO95487 1268 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 POU5F1Q01860 360 aaKnown RBP15.33■□□□□ 0.04
VARS-228ENST00000495010 ZNF252P-AS1Q0IIN9 211 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 FOXC1Q12948 553 aa15.33■□□□□ 0.04
VARS-228ENST00000495010 MCM6Q14566 821 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms