RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 EPHB3P54753 998 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 EPHA5P54756 1037 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 RPL10AP62906 217 aaKnown RBP11.82□□□□□ -0.52
CPSF7-212ENST00000489728 MYL5Q02045 173 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 DUSP4Q13115 394 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 VEPH1Q14D04 833 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 MAN2A1Q16706 1144 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 IQCEQ6IPM2 695 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 OTOP3Q7RTS5 596 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 ITIH5Q86UX2 942 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 LRRTM3Q86VH5 581 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 SPATA2LQ8IUW3 424 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-212ENST00000489728 CRYBG2Q8N1P7 616 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 ATAD1Q8NBU5 361 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 B3GALNT2Q8NCR0 500 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 SEMA4DQ92854 862 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 JAKMIP2Q96AA8 810 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 FAM81BQ96LP2 452 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 PGLYRP2Q96PD5 576 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 UHRF1Q96T88 793 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-212ENST00000489728 BPIFA3Q9BQP9 254 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 PI4K2AQ9BTU6 479 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 APOL5Q9BWW9 433 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 APOBEC3GQ9HC16 384 aaKnown RBP11.82□□□□□ -0.52
CPSF7-212ENST00000489728 NFE2L3Q9Y4A8 694 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 ATP8B3O60423 1300 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 A0A0C4DFX4 3053 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 ZNF197O14709 1029 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 CCL16O15467 120 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 CILPO75339 1184 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 CAVIN2O95810 425 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 PTPN2P17706 415 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 PTPN1P18031 435 aaKnown RBP11.81□□□□□ -0.52
CPSF7-212ENST00000489728 ACAT1P24752 427 aaKnown RBP11.81□□□□□ -0.52
CPSF7-212ENST00000489728 LMO2P25791 158 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 MTIF2P46199 727 aaKnown RBP11.81□□□□□ -0.52
CPSF7-212ENST00000489728 GCNT1Q02742 428 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 TWF1Q12792 350 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 PABPC1LQ4VXU2 614 aaKnown RBP11.81□□□□□ -0.52
CPSF7-212ENST00000489728 CDKAL1Q5VV42 579 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 SPOPLQ6IQ16 392 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 SCARA5Q6ZMJ2 495 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 ZDHHC14Q8IZN3 488 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 TDRD5Q8NAT2 981 aaKnown RBP11.81□□□□□ -0.52
CPSF7-212ENST00000489728 PSMG2Q969U7 264 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 ACSF2Q96CM8 615 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-212ENST00000489728 ZNF512Q96ME7 567 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-212ENST00000489728 NT5C1BQ96P26 610 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 NT5C1AQ9BXI3 368 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 ELOVL4Q9GZR5 314 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 SDCBP2Q9H190 292 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 CRISPLD1Q9H336 500 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 CRTAC1Q9NQ79 661 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 ABI2Q9NYB9 513 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-212ENST00000489728 GTF3C4Q9UKN8 822 aa11.81□□□□□ -0.52
CPSF7-212ENST00000489728 PTPRDP23468 1912 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 MYBPHLA2RUH7 354 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 KCNJ18B7U540 433 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 TRIM66O15016 1216 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 TPM2P07951 284 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 PDGFRBP09619 1106 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 WEE2P0C1S8 567 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 FSHRP23945 695 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 RAP1GAPP47736 663 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 NDST1P52848 882 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 CDH8P55286 799 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 PSMC1P62191 440 aaKnown RBP11.8□□□□□ -0.52
CPSF7-212ENST00000489728 CUL2Q13617 745 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 KCNJ12Q14500 433 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 MGAT5BQ3V5L5 792 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 TCP11X2Q5H9J9 407 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 C11orf57Q6ZUT1 292 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-212ENST00000489728 ENOSF1Q7L5Y1 443 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 GRASPQ7Z6J2 395 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-212ENST00000489728 ANKRD20A12PQ8NF67 263 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 LMO3Q8TAP4 145 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 MYLPFQ96A32 169 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 PCED1BQ96HM7 432 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 SPATA17Q96L03 361 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 SEPT5Q99719 369 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-212ENST00000489728 TUBGCP2Q9BSJ2 902 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 ASAH2Q9NR71 780 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 TMLHEQ9NVH6 421 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 EHD2Q9NZN4 543 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 CEP72Q9P209 647 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 EPS15L1Q9UBC2 864 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 DNMT3BQ9UBC3 853 aaKnown RBP11.8□□□□□ -0.52
CPSF7-212ENST00000489728 ZMYM5Q9UJ78 669 aa11.8□□□□□ -0.52
CPSF7-212ENST00000489728 C5orf42Q9H799 3197 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 SOBPA7XYQ1 873 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 ATP2C2O75185 946 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 RHOP08100 348 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 CSH1P0DML2 217 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 CSH2P0DML3 217 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 ATF6P18850 670 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 MDH1BQ5I0G3 518 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 CYP4A22Q5TCH4 519 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 GBP6Q6ZN66 633 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 PDZD4Q76G19 769 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms