RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 THEM5Q8N1Q8 247 aa9.22□□□□□ -0.93
PRKCB-208ENST00000487674 CELF5Q8N6W0 485 aaKnown RBP9.22□□□□□ -0.93
PRKCB-208ENST00000487674 FAM200AQ8TCP9 573 aa9.22□□□□□ -0.93
PRKCB-208ENST00000487674 SPPL2BQ8TCT7 592 aa9.22□□□□□ -0.93
PRKCB-208ENST00000487674 ZNF560Q96MR9 790 aa9.22□□□□□ -0.93
PRKCB-208ENST00000487674 LPIN3Q9BQK8 851 aa9.22□□□□□ -0.93
PRKCB-208ENST00000487674 PYM1Q9BRP8 204 aaKnown RBP9.22□□□□□ -0.93
PRKCB-208ENST00000487674 TASP1Q9H6P5 420 aa9.22□□□□□ -0.93
PRKCB-208ENST00000487674 DPP3Q9NY33 737 aa9.22□□□□□ -0.93
PRKCB-208ENST00000487674 SEL1LQ9UBV2 794 aa9.22□□□□□ -0.93
PRKCB-208ENST00000487674 STK17AQ9UEE5 414 aa9.22□□□□□ -0.93
PRKCB-208ENST00000487674 ZMYM5Q9UJ78 669 aa9.22□□□□□ -0.93
PRKCB-208ENST00000487674 CDV3Q9UKY7 258 aaKnown RBP9.22□□□□□ -0.93
PRKCB-208ENST00000487674 USP18Q9UMW8 372 aa9.22□□□□□ -0.93
PRKCB-208ENST00000487674 LRP3O75074 770 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 IL18RAPO95256 599 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 TGM1P22735 817 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 DDIT3P35638 169 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 PNPLA4P41247 253 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 CYP4F8P98187 520 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 POSTNQ15063 836 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 TAF12Q16514 161 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 WDR44Q5JSH3 913 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 WSCD1Q658N2 575 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 TXNDC11Q6PKC3 985 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 CRELD2Q6UXH1 353 aaPredicted RBP9.21□□□□□ -0.94
PRKCB-208ENST00000487674 Q6ZS52 159 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 ZNF720Q7Z2F6 126 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 BPIFB1Q8TDL5 484 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 POMGNT1Q8WZA1 660 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 ZFYVE19Q96K21 471 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 LRRC3BQ96PB8 259 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 IL21Q9HBE4 155 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 RBM12Q9NTZ6 932 aaKnown RBP9.21□□□□□ -0.94
PRKCB-208ENST00000487674 ABI2Q9NYB9 513 aaPredicted RBP9.21□□□□□ -0.94
PRKCB-208ENST00000487674 GTSE1Q9NYZ3 720 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 CCDC39Q9UFE4 941 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 EXOC7Q9UPT5 735 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 SPTBN2O15020 2390 aa9.21□□□□□ -0.94
PRKCB-208ENST00000487674 VPS37CA5D8V6 355 aaPredicted RBP9.2□□□□□ -0.94
PRKCB-208ENST00000487674 KPNA7A9QM74 516 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 K7ESF4 209 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 RETP07949 1114 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 HAPLN1P10915 354 aaPredicted RBP9.2□□□□□ -0.94
PRKCB-208ENST00000487674 GAP43P17677 238 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 PDCP20941 246 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 DDX6P26196 483 aaKnown RBP eCLIP9.2□□□□□ -0.94
PRKCB-208ENST00000487674 ADSSP30520 456 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 HOXA6P31267 233 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 CNR2P34972 360 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 TXLNAP40222 546 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 TSPY1Q01534 308 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 CCINQ13939 588 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 SIM2Q14190 667 aaPredicted RBP9.2□□□□□ -0.94
PRKCB-208ENST00000487674 PTPAQ15257 358 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 LPAL2Q16609 132 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 ITPRIPL2Q3MIP1 535 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 L1TD1Q5T7N2 865 aaKnown RBP9.2□□□□□ -0.94
PRKCB-208ENST00000487674 PRR23BQ6ZRT6 265 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 DYMQ7RTS9 669 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 LRRTM3Q86VH5 581 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 LONP2Q86WA8 852 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 GPIHBP1Q8IV16 184 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 BRSK2Q8IWQ3 736 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 DCP1BQ8IZD4 617 aaKnown RBP9.2□□□□□ -0.94
PRKCB-208ENST00000487674 CMTM8Q8IZV2 173 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 SYNPOQ8N3V7 929 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 LEO1Q8WVC0 666 aaPredicted RBP9.2□□□□□ -0.94
PRKCB-208ENST00000487674 TATDN2Q93075 761 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 EPSTI1Q96J88 318 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 RTKNQ9BST9 563 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 STRA6Q9BX79 667 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 IKZF4Q9H2S9 585 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 MRPL44Q9H9J2 332 aaKnown RBP9.2□□□□□ -0.94
PRKCB-208ENST00000487674 KIF9Q9HAQ2 790 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 PARD6AQ9NPB6 346 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 OLFML3Q9NRN5 406 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 THG1LQ9NWX6 298 aaKnown RBP9.2□□□□□ -0.94
PRKCB-208ENST00000487674 FBXO2Q9UK22 296 aaPredicted RBP9.2□□□□□ -0.94
PRKCB-208ENST00000487674 PCDHB5Q9Y5E4 795 aa9.2□□□□□ -0.94
PRKCB-208ENST00000487674 ZNF638Q14966 1978 aaKnown RBP9.2□□□□□ -0.94
PRKCB-208ENST00000487674 MYMKA6NI61 221 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 SOBPA7XYQ1 873 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 CHURC1-FNTBB4DL54 471 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 ITGB3P05106 788 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 HMGA1P17096 107 aaKnown RBP9.19□□□□□ -0.94
PRKCB-208ENST00000487674 POLR2BP30876 1174 aaKnown RBP9.19□□□□□ -0.94
PRKCB-208ENST00000487674 AVPR1AP37288 418 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 FNTBP49356 437 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 CDR1P51861 262 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 ATXN1P54253 815 aaKnown RBP9.19□□□□□ -0.94
PRKCB-208ENST00000487674 NLRP12P59046 1061 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 TFAMQ00059 246 aaKnown RBP9.19□□□□□ -0.94
PRKCB-208ENST00000487674 TNK2Q07912 1038 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 DMWDQ09019 674 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 SPEM2Q0P670 501 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 ALCAMQ13740 583 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 PON2Q15165 354 aa9.19□□□□□ -0.94
PRKCB-208ENST00000487674 NFE2Q16621 373 aaPredicted RBP9.19□□□□□ -0.94
PRKCB-208ENST00000487674 RRAGBQ5VZM2 374 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms