RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 DSEQ9UL01 958 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 TBX20Q9UMR3 447 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 CCL26Q9Y258 94 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 INVSQ9Y283 1065 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 STK24Q9Y6E0 443 aa8.3□□□□□ -1.08
PDPN-205ENST00000487038 PTPN13Q12923 2485 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 PLXNB3Q9ULL4 1909 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 GON4LQ3T8J9 2241 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 OTOL1A6NHN0 477 aaPredicted RBP8.29□□□□□ -1.08
PDPN-205ENST00000487038 CLDN3O15551 220 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 TOM1L1O75674 476 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 CFIP05156 583 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 CXCL8P10145 99 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 ARSAP15289 507 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 BCKDHBP21953 392 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 U2AF2P26368 475 aaKnown RBP eCLIP8.29□□□□□ -1.08
PDPN-205ENST00000487038 NPTX2P47972 431 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 FAM160A1Q05DH4 1040 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 GFPT1Q06210 699 aaPredicted RBP8.29□□□□□ -1.08
PDPN-205ENST00000487038 SCRN1Q12765 414 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 SCAPQ12770 1279 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 ORC2Q13416 577 aaPredicted RBP8.29□□□□□ -1.08
PDPN-205ENST00000487038 KYAT1Q16773 422 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 LYSMD4Q5XG99 296 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 ARMCX6Q7L4S7 300 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 RAB44Q7Z6P3 723 aaPredicted RBP8.29□□□□□ -1.08
PDPN-205ENST00000487038 PIP4P1Q86T03 277 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 TTC30AQ86WT1 665 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 METTL23Q86XA0 190 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 THEM5Q8N1Q8 247 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 CHCHD4Q8N4Q1 142 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 TTC9BQ8N6N2 239 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 MDGA1Q8NFP4 955 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 OSCP1Q8WVF1 389 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 USP13Q92995 863 aaPredicted RBP8.29□□□□□ -1.08
PDPN-205ENST00000487038 TNFRSF25Q93038 417 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 TSPAN18Q96SJ8 248 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 GTPBP2Q9BX10 602 aaKnown RBP8.29□□□□□ -1.08
PDPN-205ENST00000487038 BHMT2Q9H2M3 363 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 FBRSL1Q9HCM7 1045 aaKnown RBP8.29□□□□□ -1.08
PDPN-205ENST00000487038 POLMQ9NP87 494 aaPredicted RBP8.29□□□□□ -1.08
PDPN-205ENST00000487038 GJB4Q9NTQ9 266 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 BCCIPQ9P287 314 aaKnown RBP eCLIP8.29□□□□□ -1.08
PDPN-205ENST00000487038 ARHGAP28Q9P2N2 729 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 ORC3Q9UBD5 711 aaPredicted RBP8.29□□□□□ -1.08
PDPN-205ENST00000487038 UXTQ9UBK9 157 aaPredicted RBP8.29□□□□□ -1.08
PDPN-205ENST00000487038 MMP17Q9ULZ9 603 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 SLC6A14Q9UN76 642 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 PCDHB9Q9Y5E1 797 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 UNC79Q9P2D8 2635 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 SCN1AP35498 2009 aa8.29□□□□□ -1.08
PDPN-205ENST00000487038 ATXN2Q99700 1313 aaKnown RBP8.29□□□□□ -1.08
PDPN-205ENST00000487038 SHROOM3Q8TF72 1996 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 ASXL3Q9C0F0 2248 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 AP5Z1O43299 807 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 EPB41L2O43491 1005 aaKnown RBP8.28□□□□□ -1.08
PDPN-205ENST00000487038 NFATC1O95644 943 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 CKMP06732 381 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 SYPP08247 313 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 CLTAP09496 248 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 OR52Z1P0C646 297 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 CSH1P0DML2 217 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 CSH2P0DML3 217 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 MCM7P33993 719 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 CCT6AP40227 531 aaKnown RBP8.28□□□□□ -1.08
PDPN-205ENST00000487038 P2RY2P41231 377 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 SMTNP53814 917 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 SEC13P55735 322 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 NLRP12P59046 1061 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 MRPS21P82921 87 aaKnown RBP8.28□□□□□ -1.08
PDPN-205ENST00000487038 CRY1Q16526 586 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 DUOXA1Q1HG43 343 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 SLC10A6Q3KNW5 377 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 HSF5Q4G112 596 aaPredicted RBP8.28□□□□□ -1.08
PDPN-205ENST00000487038 PEAR1Q5VY43 1037 aaPredicted RBP8.28□□□□□ -1.08
PDPN-205ENST00000487038 ZPBP2Q6X784 338 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 DIS3L2Q8IYB7 885 aaKnown RBP8.28□□□□□ -1.08
PDPN-205ENST00000487038 GLIS3Q8NEA6 775 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 TTC16Q8NEE8 873 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 GIPC2Q8TF65 315 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 RAB34Q9BZG1 259 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 TM6SF1Q9BZW5 370 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 ZCWPW1Q9H0M4 648 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 TMEM206Q9H813 350 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 SCUBE2Q9NQ36 999 aa8.28□□□□□ -1.08
PDPN-205ENST00000487038 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 TRAV19A0A0A6YYK7 116 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 ABLIM1O14639 778 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 HIP1RO75146 1068 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 F11P03951 625 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 CYP11A1P05108 521 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 SERPINF2P08697 491 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 USP17L7P0C7H9 530 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 HAPLN1P10915 354 aaPredicted RBP8.27□□□□□ -1.09
PDPN-205ENST00000487038 NMT1P30419 496 aaKnown RBP8.27□□□□□ -1.09
PDPN-205ENST00000487038 PDE6CP51160 858 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 LILRA4P59901 499 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 SPAG1Q07617 926 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 MCL1Q07820 350 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 C19orf57Q0VDD7 668 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms