RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ELMO3Q96BJ8 720 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 FUBP3Q96I24 572 aaKnown RBP eCLIP11.56□□□□□ -0.56
ATG4B-219ENST00000479941 TNIP3Q96KP6 325 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 PKMYT1Q99640 499 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 TUBGCP2Q9BSJ2 902 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 FUCA2Q9BTY2 467 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 DNAI2Q9GZS0 605 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 PIDD1Q9HB75 910 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 ABCB6Q9NP58 842 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.56□□□□□ -0.56
ATG4B-219ENST00000479941 PRKAG3Q9UGI9 489 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 GTF3C4Q9UKN8 822 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 MUC3AQ02505 3323 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 MYBPHLA2RUH7 354 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 GTPBP10A4D1E9 387 aaKnown RBP11.55□□□□□ -0.56
ATG4B-219ENST00000479941 SMTNL1A8MU46 457 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 CCL16O15467 120 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 HCRTO43612 131 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 CAVIN2O95810 425 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 WEE2P0C1S8 567 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 PTPN1P18031 435 aaKnown RBP11.55□□□□□ -0.56
ATG4B-219ENST00000479941 TBXAS1P24557 533 aaPredicted RBP11.55□□□□□ -0.56
ATG4B-219ENST00000479941 ALDH1A3P47895 512 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 NDST1P52848 882 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 PSMC1P62191 440 aaKnown RBP11.55□□□□□ -0.56
ATG4B-219ENST00000479941 TWF1Q12792 350 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 CUL2Q13617 745 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 ZSCAN23Q3MJ62 389 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 MGAT5BQ3V5L5 792 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 HSP90AA4PQ58FG1 418 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 SPATA2LQ8IUW3 424 aaPredicted RBP11.55□□□□□ -0.56
ATG4B-219ENST00000479941 CRYBG2Q8N1P7 616 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 ELMOD1Q8N336 334 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 ANKRD20A12PQ8NF67 263 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 MYCBPAPQ8TBZ2 947 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 TATDN2Q93075 761 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 NT5C1BQ96P26 610 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 PHF7Q9BWX1 381 aaPredicted RBP11.55□□□□□ -0.56
ATG4B-219ENST00000479941 SDCBP2Q9H190 292 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 CRISPLD1Q9H336 500 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 NDST4Q9H3R1 872 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 WDR6Q9NNW5 1121 aaKnown RBP11.55□□□□□ -0.56
ATG4B-219ENST00000479941 CRTAC1Q9NQ79 661 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 TMLHEQ9NVH6 421 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 FANCLQ9NW38 375 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 ABI2Q9NYB9 513 aaPredicted RBP11.55□□□□□ -0.56
ATG4B-219ENST00000479941 SLC27A5Q9Y2P5 690 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 YIPF1Q9Y548 306 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 NME7Q9Y5B8 376 aa11.55□□□□□ -0.56
ATG4B-219ENST00000479941 ATP2C2O75185 946 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 CILPO75339 1184 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 TPM2P07951 284 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 HAPLN1P10915 354 aaPredicted RBP11.54□□□□□ -0.56
ATG4B-219ENST00000479941 PTPN2P17706 415 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 CD58P19256 250 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 ZNF165P49910 485 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 EPHB3P54753 998 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 YWHAEP62258 255 aaKnown RBP11.54□□□□□ -0.56
ATG4B-219ENST00000479941 GCNT1Q02742 428 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 NCAPHQ15003 741 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 VWA3BQ502W6 1294 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 IQCEQ6IPM2 695 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 VSTM1Q6UX27 236 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 GBP6Q6ZN66 633 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 B3GALNT2Q8NCR0 500 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 LMO3Q8TAP4 145 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 MYLPFQ96A32 169 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 ZNF512Q96ME7 567 aaPredicted RBP11.54□□□□□ -0.56
ATG4B-219ENST00000479941 SEPT5Q99719 369 aaPredicted RBP11.54□□□□□ -0.56
ATG4B-219ENST00000479941 NT5C1AQ9BXI3 368 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 DPEP3Q9H4B8 488 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 POMKQ9H5K3 350 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 CISHQ9NSE2 258 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 GCNT4Q9P109 453 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 CDH22Q9UJ99 828 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 ASB3Q9Y575 518 aa11.54□□□□□ -0.56
ATG4B-219ENST00000479941 CUL9Q8IWT3 2517 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 BECN2A8MW95 431 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 CDK11BP21127 795 aaKnown RBP11.53□□□□□ -0.56
ATG4B-219ENST00000479941 CYP2F1P24903 491 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 MAGEA11P43364 429 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 RPL10AP62906 217 aaKnown RBP11.53□□□□□ -0.56
ATG4B-219ENST00000479941 CYP27A1Q02318 531 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 LRMPQ12912 555 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 VEPH1Q14D04 833 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 EXOC3L4Q17RC7 722 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 MDH1BQ5I0G3 518 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 MIIPQ5JXC2 388 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 GRASPQ7Z6J2 395 aaPredicted RBP11.53□□□□□ -0.56
ATG4B-219ENST00000479941 ITIH5Q86UX2 942 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 ADHFE1Q8IWW8 467 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 PPM1KQ8N3J5 372 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 AOPEPQ8N6M6 819 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 LEMD2Q8NC56 503 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 FEZF2Q8TBJ5 459 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 PCED1BQ96HM7 432 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 FAM81BQ96LP2 452 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 CEP295NLQ96MC4 621 aa11.53□□□□□ -0.56
ATG4B-219ENST00000479941 INTS2Q9H0H0 1204 aaKnown RBP11.53□□□□□ -0.56
ATG4B-219ENST00000479941 AVENQ9NQS1 362 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms