RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 NLRP12P59046 1061 aa20.52■□□□□ 0.88
NCKIPSD-209ENST00000470006 ANO7Q6IWH7 933 aa20.52■□□□□ 0.88
NCKIPSD-209ENST00000470006 C1orf186Q6ZWK4 172 aa20.52■□□□□ 0.88
NCKIPSD-209ENST00000470006 TMEM161BQ8NDZ6 487 aa20.52■□□□□ 0.88
NCKIPSD-209ENST00000470006 NTPCRQ9BSD7 190 aaKnown RBP20.52■□□□□ 0.88
NCKIPSD-209ENST00000470006 ZCWPW1Q9H0M4 648 aa20.52■□□□□ 0.88
NCKIPSD-209ENST00000470006 ECT2Q9H8V3 914 aa20.52■□□□□ 0.88
NCKIPSD-209ENST00000470006 WDFY3Q8IZQ1 3526 aa20.52■□□□□ 0.88
NCKIPSD-209ENST00000470006 HAPLN1P10915 354 aaPredicted RBP20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 PLS3P13797 630 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 IFNAR2P48551 515 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 LIG4P49917 911 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 SEC13P55735 322 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 PDIA5Q14554 519 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 CCDC26Q8TAB7 109 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 SPPL2BQ8TCT7 592 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 C2orf15Q8WU43 125 aaKnown RBP20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 SPIRE2Q8WWL2 714 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 C8orf76Q96K31 380 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 TIPINQ9BVW5 301 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 NUSAP1Q9BXS6 441 aaKnown RBP20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 HAPLN2Q9GZV7 340 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 TRPC7Q9HCX4 862 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 DSEQ9UL01 958 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 TBX20Q9UMR3 447 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 NOL7Q9UMY1 257 aaKnown RBP20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 NEUROG3Q9Y4Z2 214 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 DMXL2Q8TDJ6 3036 aa20.51■□□□□ 0.87
NCKIPSD-209ENST00000470006 PP2D1A8MPX8 630 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 MAP3K13O43283 966 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 F11P03951 625 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 BCKDHBP21953 392 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 PAX3P23760 479 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 LMAN2Q12907 356 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 NR1H3Q13133 447 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 NBR1Q14596 966 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 MTF1Q14872 753 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 ENOX2Q16206 610 aaKnown RBP20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 KYAT1Q16773 422 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 C2orf27AQ580R0 203 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 TRIM61Q5EBN2 209 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 SPATA1Q5VX52 437 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 C9orf57Q5W0N0 161 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 JADE1Q6IE81 842 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 TMEM150AQ86TG1 271 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 MYO16Q9Y6X6 1858 aa20.5■□□□□ 0.87
NCKIPSD-209ENST00000470006 TCHHQ07283 1943 aa20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 CYB561D2O14569 222 aa20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 CDC25AP30304 524 aa20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 RDXP35241 583 aaKnown RBP20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 SMARCB1Q12824 385 aa20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 MON1AQ86VX9 555 aa20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 STKLD1Q8NE28 680 aa20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 RIN3Q8TB24 985 aa20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 OSCP1Q8WVF1 389 aa20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 ATP2A3Q93084 1043 aa20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 PYM1Q9BRP8 204 aaKnown RBP20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 FOXP1Q9H334 677 aaPredicted RBP20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 KLK13Q9UKR3 277 aa20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 WNT6Q9Y6F9 365 aa20.49■□□□□ 0.87
NCKIPSD-209ENST00000470006 TSC2P49815 1807 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 SPAARA0A1B0GVQ0 90 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 TULP1O00294 542 aaPredicted RBP20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 PRPF40AO75400 957 aaKnown RBP20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 CYP11A1P05108 521 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 GUCY2CP25092 1073 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 SIM1P81133 766 aaPredicted RBP20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 TMEM132DQ14C87 1099 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 ARMCX6Q7L4S7 300 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 LRRTM3Q86VH5 581 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 DCP1BQ8IZD4 617 aaKnown RBP20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 CCDC33Q8N5R6 958 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 C4orf32Q8N8J7 132 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 IGSF22Q8N9C0 903 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 EZH1Q92800 747 aaPredicted RBP20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 TSPAN18Q96SJ8 248 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 MSRB2Q9Y3D2 182 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 PCDHB5Q9Y5E4 795 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 PCNX2A6NKB5 2137 aa20.48■□□□□ 0.87
NCKIPSD-209ENST00000470006 H0YCG3 227 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 HNRNPDLO14979 420 aaKnown RBP20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 OGTO15294 1046 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 SEC24BO95487 1268 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 CKMP06732 381 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 CSH1P0DML2 217 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 CSH2P0DML3 217 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 HMGA1P17096 107 aaKnown RBP20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 GPR15P49685 360 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 ATXN3P54252 364 aaPredicted RBP20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 ZNF268Q14587 947 aaPredicted RBP20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 SDHAF4Q5VUM1 108 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 LPCAT2Q7L5N7 544 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 KCNK18Q7Z418 384 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 PI4K2AQ9BTU6 479 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 MSTO1Q9BUK6 570 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 GON4LQ3T8J9 2241 aa20.47■□□□□ 0.87
NCKIPSD-209ENST00000470006 SCN1AP35498 2009 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 KIAA1549LQ6ZVL6 1849 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 OBSL1O75147 1896 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 TRAV19A0A0A6YYK7 116 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms