RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 FAM49BQ9NUQ9 324 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 CEP290O15078 2479 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 H7C4K7 107 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 O00370 1275 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 MED7O43513 233 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 NRDCO43847 1150 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 URODP06132 367 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 PTPN1P18031 435 aaKnown RBP12.59□□□□□ -0.39
RNF13-208ENST00000467996 SSTR3P32745 418 aaPredicted RBP12.59□□□□□ -0.39
RNF13-208ENST00000467996 DSG1Q02413 1049 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 MTF1Q14872 753 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 PSMD5Q16401 504 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 ASTE1Q2TB18 679 aaPredicted RBP12.59□□□□□ -0.39
RNF13-208ENST00000467996 CTXN3Q4LDR2 81 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 SGO2Q562F6 1265 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 MDH1BQ5I0G3 518 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 PRSS55Q6UWB4 352 aaPredicted RBP12.59□□□□□ -0.39
RNF13-208ENST00000467996 RAD9BQ6WBX8 426 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 ZNF677Q86XU0 584 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 VPS52Q8N1B4 723 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 C12orf29Q8N999 325 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 LNX1Q8TBB1 728 aaPredicted RBP12.59□□□□□ -0.39
RNF13-208ENST00000467996 ZNF606Q8WXB4 792 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 RIN2Q8WYP3 895 aaPredicted RBP12.59□□□□□ -0.39
RNF13-208ENST00000467996 PIK3R5Q8WYR1 880 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 SAMD11Q96NU1 681 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 TGS1Q96RS0 853 aaKnown RBP12.59□□□□□ -0.39
RNF13-208ENST00000467996 PKMYT1Q99640 499 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 ZCWPW1Q9H0M4 648 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 ZBP1Q9H171 429 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 DEF6Q9H4E7 631 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 MTRRQ9UBK8 725 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 MSRAQ9UJ68 235 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 KIAA1257Q9ULG3 409 aa12.59□□□□□ -0.39
RNF13-208ENST00000467996 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.59□□□□□ -0.39
RNF13-208ENST00000467996 MYBPHLA2RUH7 354 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 OR6C75A6NL08 312 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 DDX3XO00571 662 aaKnown RBP eCLIP12.58□□□□□ -0.42e-7■■■■□ 20
RNF13-208ENST00000467996 C2CD2LO14523 706 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 TBC1D4O60343 1298 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 RB1P06400 928 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 CFHP08603 1231 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 OR4Q2P0C623 313 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 CCDC130P13994 396 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 TNFAIP3P21580 790 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 DNAJB2P25686 324 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 ANXA13P27216 316 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 KIF11P52732 1056 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 ERVK-21P61565 698 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 TSPY1Q01534 308 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 BMS1Q14692 1282 aaKnown RBP12.58□□□□□ -0.4
RNF13-208ENST00000467996 GOLGA7BQ2TAP0 167 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 PPP1R26Q5T8A7 1209 aaPredicted RBP12.58□□□□□ -0.4
RNF13-208ENST00000467996 PPP2R2DQ66LE6 453 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 ARHGAP17Q68EM7 881 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 KIAA1841Q6NSI8 718 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 FAM171BQ6P995 826 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 RSPO2Q6UXX9 243 aaPredicted RBP12.58□□□□□ -0.4
RNF13-208ENST00000467996 VPS36Q86VN1 386 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 GLYCTKQ8IVS8 523 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 CCDC42Q96M95 316 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 C11orf84Q9BUA3 381 aaPredicted RBP12.58□□□□□ -0.4
RNF13-208ENST00000467996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.58□□□□□ -0.4
RNF13-208ENST00000467996 OXCT2Q9BYC2 517 aaPredicted RBP12.58□□□□□ -0.4
RNF13-208ENST00000467996 ALG13Q9NP73 1137 aaKnown RBP12.58□□□□□ -0.4
RNF13-208ENST00000467996 SPTLC3Q9NUV7 552 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 SEPT11Q9NVA2 429 aaKnown RBP12.58□□□□□ -0.4
RNF13-208ENST00000467996 TMLHEQ9NVH6 421 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 GTF3C4Q9UKN8 822 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 TSPAN16Q9UKR8 245 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 PCDHGC3Q9UN70 934 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 LZTS1Q9Y250 596 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 BACE2Q9Y5Z0 518 aa12.58□□□□□ -0.4
RNF13-208ENST00000467996 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.58□□□□□ -0.4
RNF13-208ENST00000467996 MYO16Q9Y6X6 1858 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 A0A087X0T9 212 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 M0QYV0 167 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 ARHGAP6O43182 974 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 AKR1B10O60218 316 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 MICAL2O94851 1124 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 FAM228BP0C875 321 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 CTSAP10619 480 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 DNAJB1P25685 340 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 ADORA2BP29275 332 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 CYLC1P35663 651 aaPredicted RBP12.57□□□□□ -0.4
RNF13-208ENST00000467996 SMAD3P84022 425 aaKnown RBP12.57□□□□□ -0.4
RNF13-208ENST00000467996 UBE3AQ05086 875 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 GFPT1Q06210 699 aaPredicted RBP12.57□□□□□ -0.4
RNF13-208ENST00000467996 STILQ15468 1287 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 PTPN14Q15678 1187 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 MAPRE1Q15691 268 aaKnown RBP12.57□□□□□ -0.4
RNF13-208ENST00000467996 CNGA2Q16280 664 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 SLC18A3Q16572 532 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 SLC39A12Q504Y0 691 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 DENND1BQ6P3S1 775 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 LCLAT1Q6UWP7 414 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 FAM35AQ86V20 835 aa12.57□□□□□ -0.4
RNF13-208ENST00000467996 LRRTM3Q86VH5 581 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms