RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 TRMT61BQ9BVS5 477 aaKnown RBP20.3■□□□□ 0.84
COL5A1-203ENST00000460264 ATXN3LQ9H3M9 355 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 GOLPH3LQ9H4A5 285 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 IL21Q9HBE4 155 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 ABCB6Q9NP58 842 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 KIF26AQ9ULI4 1882 aaPredicted RBP20.29■□□□□ 0.84
COL5A1-203ENST00000460264 ZNF638Q14966 1978 aaKnown RBP20.29■□□□□ 0.84
COL5A1-203ENST00000460264 KANSL1LA0AUZ9 987 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 EXOC3O60645 756 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 RPN1P04843 607 aaKnown RBP20.29■□□□□ 0.84
COL5A1-203ENST00000460264 PSMC3P17980 439 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 PCSK1P29120 753 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 TPRG1Q6ZUI0 275 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 DPH6Q7L8W6 267 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 ZNF516Q92618 1163 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 RSPRY1Q96DX4 576 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 PI4K2AQ9BTU6 479 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 KCTD10Q9H3F6 313 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 BRD9Q9H8M2 597 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 GDPD2Q9HCC8 539 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 HEBP1Q9NRV9 189 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 GTF3C4Q9UKN8 822 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 GREB1Q4ZG55 1949 aa20.29■□□□□ 0.84
COL5A1-203ENST00000460264 HEPACAM2A8MVW5 462 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 LRRN2O75325 713 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 GLULP15104 373 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 CDC25CP30307 473 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 ANGPT1Q15389 498 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 ARHGAP15Q53QZ3 475 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 GPR158Q5T848 1215 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 SLC9A9Q8IVB4 645 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 PLEKHO2Q8TD55 490 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 TMEM174Q8WUU8 243 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 E2F7Q96AV8 911 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 DMAC2Q9NW81 257 aa20.28■□□□□ 0.84
COL5A1-203ENST00000460264 CST3P01034 146 aaPredicted RBP20.27■□□□□ 0.84
COL5A1-203ENST00000460264 HMGA1P17096 107 aaKnown RBP20.27■□□□□ 0.84
COL5A1-203ENST00000460264 CD72P21854 359 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 CYP2F1P24903 491 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 GDI1P31150 447 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 CASP4P49662 377 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 GPR15P49685 360 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 CYP4F8P98187 520 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 DPYDQ12882 1025 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 UBXN2BQ14CS0 331 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 TAF12Q16514 161 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 KRBA2Q6ZNG9 492 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 ARID3BQ8IVW6 561 aaPredicted RBP20.27■□□□□ 0.84
COL5A1-203ENST00000460264 MFSD6LQ8IWD5 586 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 IRF7Q92985 503 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 GCNAQ96QF7 691 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 MMS19Q96T76 1030 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 SYT15Q9BQS2 421 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 LTB4R2Q9NPC1 389 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 MTF2Q9Y483 593 aaPredicted RBP20.27■□□□□ 0.84
COL5A1-203ENST00000460264 F5P12259 2224 aa20.27■□□□□ 0.84
COL5A1-203ENST00000460264 ZFHX2Q9C0A1 2572 aaPredicted RBP20.27■□□□□ 0.83
COL5A1-203ENST00000460264 VPS13AQ96RL7 3174 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 MYBPHLA2RUH7 354 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 SHISA7A6NL88 538 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 PDXKO00764 312 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 ATP2C2O75185 946 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 RHOBTB3O94955 611 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 NR3C1P04150 777 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 WARSP23381 471 aaKnown RBP20.26■□□□□ 0.83
COL5A1-203ENST00000460264 LMO2P25791 158 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 PSMC1P62191 440 aaKnown RBP20.26■□□□□ 0.83
COL5A1-203ENST00000460264 CFAP221Q4G0U5 840 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 SDHAF4Q5VUM1 108 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 FAM171BQ6P995 826 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 TMEM150AQ86TG1 271 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 STKLD1Q8NE28 680 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 FUBP3Q96I24 572 aaKnown RBP eCLIP20.26■□□□□ 0.83
COL5A1-203ENST00000460264 OSBPL6Q9BZF3 934 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 TASP1Q9H6P5 420 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 TRPV5Q9NQA5 729 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 CDH9Q9ULB4 789 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 CACNA1IQ9P0X4 2223 aa20.26■□□□□ 0.83
COL5A1-203ENST00000460264 ANAPC1Q9H1A4 1944 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 FAM170BA6NMN3 283 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 LRRIQ3A6PVS8 624 aaPredicted RBP20.25■□□□□ 0.83
COL5A1-203ENST00000460264 PROB1E7EW31 1015 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 ARNTLO00327 626 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 ZNF202O95125 648 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 PRAMEF12O95522 483 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 STAU1O95793 577 aaKnown RBP20.25■□□□□ 0.83
COL5A1-203ENST00000460264 CSH1P0DML2 217 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 CSH2P0DML3 217 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 WEE1P30291 646 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 NBL1P41271 181 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 NLRP12P59046 1061 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 MYL6P60660 151 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 RPL10AP62906 217 aaKnown RBP20.25■□□□□ 0.83
COL5A1-203ENST00000460264 CLDN10P78369 228 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 FCHO2Q0JRZ9 810 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 DDR2Q16832 855 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 TDRD10Q5VZ19 366 aaKnown RBP20.25■□□□□ 0.83
COL5A1-203ENST00000460264 SPATA2LQ8IUW3 424 aaPredicted RBP20.25■□□□□ 0.83
COL5A1-203ENST00000460264 GPIHBP1Q8IV16 184 aa20.25■□□□□ 0.83
COL5A1-203ENST00000460264 PARD3BQ8TEW8 1205 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms