RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 OR10T2Q8NGX3 314 aa11.41□□□□□ -0.58
UBR4-208ENST00000459947 FAM200AQ8TCP9 573 aa11.41□□□□□ -0.58
UBR4-208ENST00000459947 SPATA17Q96L03 361 aa11.41□□□□□ -0.58
UBR4-208ENST00000459947 TMEM63CQ9P1W3 806 aa11.41□□□□□ -0.58
UBR4-208ENST00000459947 NFE2L3Q9Y4A8 694 aa11.41□□□□□ -0.58
UBR4-208ENST00000459947 KCNJ18B7U540 433 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 FSHRP23945 695 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 EPHA5P54756 1037 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 KCNJ12Q14500 433 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 RNF19BQ6ZMZ0 732 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 MTSS1LQ765P7 747 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 C8orf48Q96LL4 319 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 RTP3Q9BQQ7 232 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 DENND4AQ7Z401 1863 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 CUL2Q13617 745 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 PABPC1LQ4VXU2 614 aaKnown RBP11.4□□□□□ -0.58
UBR4-208ENST00000459947 B3GALNT2Q8NCR0 500 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 ZNF707Q96C28 371 aaPredicted RBP11.4□□□□□ -0.58
UBR4-208ENST00000459947 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 BECN2A8MW95 431 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 RTN3O95197 1032 aaPredicted RBP11.4□□□□□ -0.58
UBR4-208ENST00000459947 PAEPP09466 180 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 ASPAP45381 313 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 MGAT5BQ3V5L5 792 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 RSPO2Q6UXX9 243 aaPredicted RBP11.4□□□□□ -0.58
UBR4-208ENST00000459947 TMC5Q6UXY8 1006 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 SMARCD1Q96GM5 515 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 PKMYT1Q99640 499 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 GDE1Q9NZC3 331 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 IGSF9Q9P2J2 1179 aa11.4□□□□□ -0.58
UBR4-208ENST00000459947 MFAP3P55082 362 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 DLX2Q07687 328 aaPredicted RBP11.39□□□□□ -0.59
UBR4-208ENST00000459947 MEA1Q16626 185 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 FILIP1LQ4L180 1135 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 VWA3BQ502W6 1294 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 PDZD4Q76G19 769 aaPredicted RBP11.39□□□□□ -0.59
UBR4-208ENST00000459947 ADAMTS19Q8TE59 1207 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 MRPL45Q9BRJ2 306 aaKnown RBP11.39□□□□□ -0.59
UBR4-208ENST00000459947 TUBGCP2Q9BSJ2 902 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 INTS2Q9H0H0 1204 aaKnown RBP11.39□□□□□ -0.59
UBR4-208ENST00000459947 SMYD3Q9H7B4 428 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 ABI2Q9NYB9 513 aaPredicted RBP11.39□□□□□ -0.59
UBR4-208ENST00000459947 POLIQ9UNA4 740 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 RBAK-RBAKDNI3L0D1 243 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 TWF1Q12792 350 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 EXOC3L4Q17RC7 722 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 PDZD8Q8NEN9 1154 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 OVCA2Q8WZ82 227 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 MYLPFQ96A32 169 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 TRMT2BQ96GJ1 504 aaKnown RBP11.39□□□□□ -0.59
UBR4-208ENST00000459947 PNPLA8Q9NP80 782 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 PRDM6Q9NQX0 595 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 EPS15L1Q9UBC2 864 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 LOC730098B7Z3J9 87 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 CILPO75339 1184 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 CDK11BP21127 795 aaKnown RBP11.39□□□□□ -0.59
UBR4-208ENST00000459947 WEE1P30291 646 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 TCP11X2Q5H9J9 407 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 CDKAL1Q5VV42 579 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 PSMG2Q969U7 264 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 UHRF1Q96T88 793 aaPredicted RBP11.39□□□□□ -0.59
UBR4-208ENST00000459947 SEPT5Q99719 369 aaPredicted RBP11.39□□□□□ -0.59
UBR4-208ENST00000459947 MED10Q9BTT4 135 aa11.39□□□□□ -0.59
UBR4-208ENST00000459947 NOL4O94818 638 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 ZP2Q05996 745 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 DUSP4Q13115 394 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 CLUL1Q15846 466 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 CBWD6Q4V339 395 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 CBWD3Q5JTY5 395 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 CBWD5Q5RIA9 395 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 SCARA5Q6ZMJ2 495 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 NDST4Q9H3R1 872 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 GCNT4Q9P109 453 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 MRPS23Q9Y3D9 190 aaKnown RBP11.38□□□□□ -0.59
UBR4-208ENST00000459947 CCL16O15467 120 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 ARHGAP17Q68EM7 881 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 KIAA1958Q8N8K9 716 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 HNRNPABQ99729 332 aaKnown RBP11.38□□□□□ -0.59
UBR4-208ENST00000459947 UBXN6Q9BZV1 441 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 DMAP1Q9NPF5 467 aaPredicted RBP11.38□□□□□ -0.59
UBR4-208ENST00000459947 LIMA1Q9UHB6 759 aaKnown RBP11.38□□□□□ -0.59
UBR4-208ENST00000459947 CDH7Q9ULB5 785 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 IGFBP6P24592 240 aaPredicted RBP11.38□□□□□ -0.59
UBR4-208ENST00000459947 NDST1P52848 882 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 BPIFB4P59827 614 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 TFF2Q03403 129 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 MDH1BQ5I0G3 518 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 IQCDQ96DY2 449 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 NCANO14594 1321 aa11.38□□□□□ -0.59
UBR4-208ENST00000459947 SEC24AO95486 1093 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 VDRP11473 427 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 CREBRFQ8IUR6 639 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 C12orf76Q8N812 135 aaPredicted RBP11.37□□□□□ -0.59
UBR4-208ENST00000459947 DNAJC25Q9H1X3 360 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 KIF9Q9HAQ2 790 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 APOBEC3GQ9HC16 384 aaKnown RBP11.37□□□□□ -0.59
UBR4-208ENST00000459947 HESX1Q9UBX0 185 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 MED7O43513 233 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 OR4Q2P0C623 313 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 SPATA31D3P0C874 917 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms