RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 PPP4R4Q6NUP7 873 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 POTEAQ6S8J7 498 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 GPR180Q86V85 440 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 PLPP6Q8IY26 295 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 TBC1D15Q8TC07 691 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 RASSF5Q8WWW0 418 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 GLG1Q92896 1179 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 LRGUKQ96M69 825 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 C7orf26Q96N11 449 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 PACSIN1Q9BY11 444 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 HIPK3Q9H422 1215 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 UGT1A7Q9HAW7 530 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 UGT1A10Q9HAW8 530 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 UGT1A8Q9HAW9 530 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 ARHGEF4Q9NR80 690 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 NDFIP2Q9NV92 336 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 PCYOX1Q9UHG3 505 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 SPEF1Q9Y4P9 236 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 NWD2Q9ULI1 1742 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 UTYO14607 1347 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 A0A1W2PRG0 241 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 FAM172BPA6NC97 362 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 ENPP3O14638 875 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 AREL1O15033 823 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 SH3BP5O60239 455 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 HSPA13P48723 471 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 SCNN1DP51172 638 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 HIRAP54198 1017 aaPredicted RBP11.24□□□□□ -0.61
LINC00342-202ENST00000448494 ZBTB16Q05516 673 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 PLEKHG4Q58EX7 1191 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 PPP1R2P3Q6NXS1 205 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 RNF111Q6ZNA4 994 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 NT5DC3Q86UY8 548 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 TRIM22Q8IYM9 498 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 TRIML2Q8N7C3 387 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 GCNAQ96QF7 691 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 COQ7Q99807 217 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 RUBCNLQ9H714 662 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 LRRC4BQ9NT99 713 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 FAM217BQ9NTX9 383 aaPredicted RBP11.24□□□□□ -0.61
LINC00342-202ENST00000448494 SLAIN2Q9P270 581 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 KCNJ14Q9UNX9 436 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 RTCBQ9Y3I0 505 aaKnown RBP11.24□□□□□ -0.61
LINC00342-202ENST00000448494 PCDHA3Q9Y5H8 950 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 EMSYQ7Z589 1322 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 NID2Q14112 1375 aa11.24□□□□□ -0.61
LINC00342-202ENST00000448494 UBR1Q8IWV7 1749 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 TLR2O60603 784 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 PRKCAP17252 672 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 SELENBP1Q13228 472 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 NR5A1Q13285 461 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 SLC15A2Q16348 729 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 MTHFSDQ2M296 383 aaKnown RBP11.23□□□□□ -0.61
LINC00342-202ENST00000448494 CEP78Q5JTW2 689 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 EFHC1Q5JVL4 640 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 ANKRD40Q6AI12 368 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 CCDC89Q8N998 374 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 CATSPER1Q8NEC5 780 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 TSPAN14Q8NG11 270 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 TMEM87BQ96K49 555 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 C17orf80Q9BSJ5 609 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 CALN1Q9BXU9 219 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 C1orf21Q9H246 121 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 KIAA1586Q9HCI6 787 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 SACM1LQ9NTJ5 587 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 PCDHA12Q9UN75 941 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 NAALADL1Q9UQQ1 740 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 NR2E1Q9Y466 385 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 PCDHB4Q9Y5E5 795 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 TMEM131LA2VDJ0 1609 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 GOLGA8IPA6NC78 632 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 PIK3C2BO00750 1634 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 GAKO14976 1311 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 KLRC4O43908 158 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 GMNNO75496 209 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 CRTAMO95727 393 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 TTC4O95801 387 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 ALAS1P13196 640 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 ANXA13P27216 316 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 GJA9P57773 515 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 ATP2C1P98194 919 aaPredicted RBP11.23□□□□□ -0.61
LINC00342-202ENST00000448494 KLHL38Q2WGJ6 581 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 CCBE1Q6UXH8 406 aaPredicted RBP11.23□□□□□ -0.61
LINC00342-202ENST00000448494 GPR141Q7Z602 305 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 GALNT13Q8IUC8 556 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 BBOF1Q8ND07 529 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 ZNF486Q96H40 463 aaPredicted RBP11.23□□□□□ -0.61
LINC00342-202ENST00000448494 ZBED2Q9BTP6 218 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC00342-202ENST00000448494 CDK19Q9BWU1 502 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 DNAJC17Q9NVM6 304 aaKnown RBP11.23□□□□□ -0.61
LINC00342-202ENST00000448494 APPL1Q9UKG1 709 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 AMFRQ9UKV5 643 aa11.23□□□□□ -0.61
LINC00342-202ENST00000448494 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.22□□□□□ -0.61
LINC00342-202ENST00000448494 DEXIO95424 95 aa11.22□□□□□ -0.61
LINC00342-202ENST00000448494 ACSL3O95573 720 aa11.22□□□□□ -0.61
LINC00342-202ENST00000448494 HOXB7P09629 217 aa11.22□□□□□ -0.61
LINC00342-202ENST00000448494 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
LINC00342-202ENST00000448494 DGKDQ16760 1214 aa11.22□□□□□ -0.61
LINC00342-202ENST00000448494 GRAMD1BQ3KR37 738 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms