RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 OR6Y1Q8NGX8 325 aa14.65□□□□□ -0.06
VPS52-212ENST00000445902 SERAC1Q96JX3 654 aa14.65□□□□□ -0.06
VPS52-212ENST00000445902 NT5C1BQ96P26 610 aa14.65□□□□□ -0.06
VPS52-212ENST00000445902 IWS1Q96ST2 819 aa14.65□□□□□ -0.06
VPS52-212ENST00000445902 VPS11Q9H270 941 aa14.65□□□□□ -0.06
VPS52-212ENST00000445902 ARHGAP42A6NI28 874 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 MT-ND3P03897 115 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 NSFP46459 744 aaKnown RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 AQP4P55087 323 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 DYNLT1P63172 113 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 DLG1Q12959 904 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 NFX1Q12986 1120 aaKnown RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 MFSD7Q6UXD7 560 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 NET1Q7Z628 596 aaPredicted RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 SDCCAG8Q86SQ7 713 aaPredicted RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 OLFM3Q96PB7 478 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 NACC1Q96RE7 527 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 DDX18Q9NVP1 670 aaKnown RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 SLC16A4O15374 487 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 UNGP13051 313 aaPredicted RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 TPP2P29144 1249 aaPredicted RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 HIRAP54198 1017 aaPredicted RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 ACTR3P61158 418 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 GTF2IP78347 998 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 UBAP2LQ14157 1087 aaKnown RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 BBS9Q3SYG4 887 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 PADI6Q6TGC4 694 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 ARID3BQ8IVW6 561 aaPredicted RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 SMC1BQ8NDV3 1235 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 FBXO36Q8NEA4 188 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 VTI1AQ96AJ9 217 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 CCDC124Q96CT7 223 aaKnown RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 UNC45AQ9H3U1 944 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 P4HA2O15460 535 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 BUD23O43709 281 aaKnown RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 PSMD10O75832 226 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 KRT1P04264 644 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 PRELPP51888 382 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 CACNB3P54284 484 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 MED21Q13503 144 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 ZYXQ15942 572 aaKnown RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 LMBRD2Q68DH5 695 aaPredicted RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 NCAPG2Q86XI2 1143 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 ZFPM1Q8IX07 1006 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 ALLCQ8N6M5 410 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.64□□□□□ -0.07
VPS52-212ENST00000445902 MZB1Q8WU39 189 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 WDR83Q9BRX9 315 aaKnown RBP14.64□□□□□ -0.07
VPS52-212ENST00000445902 KIFC3Q9BVG8 833 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 FOXP3Q9BZS1 431 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 GPRC5CQ9NQ84 441 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 STK24Q9Y6E0 443 aa14.64□□□□□ -0.07
VPS52-212ENST00000445902 TM9SF1O15321 606 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 MAGEC1O60732 1142 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 TM7SF2O76062 418 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 ASLP04424 464 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 ITGA2BP08514 1039 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 PEX2P28328 305 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 EPHB1P54762 984 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 NCOA4Q13772 614 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 MORF4L2Q15014 288 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 SNRNP35Q16560 246 aaKnown RBP14.63□□□□□ -0.07
VPS52-212ENST00000445902 TRMT5Q32P41 509 aaKnown RBP14.63□□□□□ -0.07
VPS52-212ENST00000445902 HSF5Q4G112 596 aaPredicted RBP14.63□□□□□ -0.07
VPS52-212ENST00000445902 NME8Q8N427 588 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 EFCAB3Q8N7B9 438 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.63□□□□□ -0.07
VPS52-212ENST00000445902 SLC26A7Q8TE54 656 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 DCAKDQ8WVC6 231 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 ABTB1Q969K4 478 aaPredicted RBP14.63□□□□□ -0.07
VPS52-212ENST00000445902 ACCSQ96QU6 501 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 STRA6Q9BX79 667 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 SHCBP1LQ9BZQ2 653 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 HSFX1Q9UBD0 423 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 TMCO1Q9UM00 188 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 PLA2G4CQ9UP65 541 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 PRR5-ARHGAP8B1AHC4 643 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 F8W8V4 182 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 SPECC1L-ADORA2AF8WAN1 911 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 PDLIM1O00151 329 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 CIITAP33076 1130 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 ARHGAP8P85298 464 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 SLC25A3Q00325 362 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 ASPHQ12797 758 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 TCP10Q12799 353 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 MAP7Q14244 749 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 KRT39Q6A163 491 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 TXNRD3NBQ6F5E7 133 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 ADGRD1Q6QNK2 874 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 RNF111Q6ZNA4 994 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 ACAD11Q709F0 780 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 PALM2Q8IXS6 379 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 ACAP3Q96P50 834 aa14.63□□□□□ -0.07
VPS52-212ENST00000445902 GAKO14976 1311 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 MYPNQ86TC9 1320 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 TCRBV7S3A2A0A539 114 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 TLR3O15455 904 aaKnown RBP14.62□□□□□ -0.07
VPS52-212ENST00000445902 PABPC4LP0CB38 370 aaKnown RBP14.62□□□□□ -0.07
VPS52-212ENST00000445902 ARP10275 920 aa14.62□□□□□ -0.07
VPS52-212ENST00000445902 DSG3P32926 999 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms