RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 LRRC3Q9BY71 257 aa16.81■□□□□ 0.28
ACTB-206ENST00000443528 SNX25Q9H3E2 840 aa16.81■□□□□ 0.28
ACTB-206ENST00000443528 APOBEC3GQ9HC16 384 aaKnown RBP16.81■□□□□ 0.28
ACTB-206ENST00000443528 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.81■□□□□ 0.288e-9■■■■■ 39.5
ACTB-206ENST00000443528 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.81■□□□□ 0.285e-8■□□□□ 10.5
ACTB-206ENST00000443528 EPS15L1Q9UBC2 864 aa16.81■□□□□ 0.28
ACTB-206ENST00000443528 DOCK6Q96HP0 2047 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 NOTCH4Q99466 2003 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 DCXO43602 365 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 STX10O60499 249 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 LAMP2P13473 410 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 ATF6P18850 670 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 CCR2P41597 374 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 ASPAP45381 313 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 MXI1P50539 228 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 EPHB3P54753 998 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 EPHA5P54756 1037 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 PLD1Q13393 1074 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 IQCEQ6IPM2 695 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 POTEHQ6S545 545 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 ELMOD1Q8N336 334 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 FGF13Q92913 245 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 TCEAL4Q96EI5 215 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 LPIN3Q9BQK8 851 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 SRRTQ9BXP5 876 aaKnown RBP16.8■□□□□ 0.28
ACTB-206ENST00000443528 DPEP3Q9H4B8 488 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 METTL14Q9HCE5 456 aaKnown RBP16.8■□□□□ 0.28
ACTB-206ENST00000443528 RWDD2AQ9UIY3 292 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 CDH7Q9ULB5 785 aa16.8■□□□□ 0.28
ACTB-206ENST00000443528 A8MXQ7 604 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 MOSPD3O75425 235 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 CLSTN1O94985 981 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 ASGR2P07307 311 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 CYP2F1P24903 491 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 NLRP12P59046 1061 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 NOP14P78316 857 aaKnown RBP16.79■□□□□ 0.28
ACTB-206ENST00000443528 PTPN21Q16825 1174 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 DPCR1Q3MIW9 517 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 CFAP221Q4G0U5 840 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 CCDC40Q4G0X9 1142 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 RBM43Q6ZSC3 357 aaKnown RBP16.79■□□□□ 0.28
ACTB-206ENST00000443528 TMC8Q8IU68 726 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 FBXL13Q8NEE6 735 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 ING5Q8WYH8 240 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 PSMG2Q969U7 264 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 BCO2Q9BYV7 579 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 ABCB6Q9NP58 842 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 RAB20Q9NX57 234 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 COQ4Q9Y3A0 265 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 MRPS23Q9Y3D9 190 aaKnown RBP16.79■□□□□ 0.28
ACTB-206ENST00000443528 ASB3Q9Y575 518 aa16.79■□□□□ 0.28
ACTB-206ENST00000443528 P4HA1P13674 534 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 ALADP13716 330 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 CEBPBP17676 345 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 PTPN1P18031 435 aaKnown RBP16.78■□□□□ 0.28
ACTB-206ENST00000443528 GPR15P49685 360 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 MARSP56192 900 aaKnown RBP16.78■□□□□ 0.28
ACTB-206ENST00000443528 MDH1BQ5I0G3 518 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 PDZD4Q76G19 769 aaPredicted RBP16.78■□□□□ 0.28
ACTB-206ENST00000443528 DNAJB7Q7Z6W7 309 aaPredicted RBP16.78■□□□□ 0.28
ACTB-206ENST00000443528 SPATA2LQ8IUW3 424 aaPredicted RBP16.78■□□□□ 0.28
ACTB-206ENST00000443528 NPAS3Q8IXF0 933 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 MYCBPAPQ8TBZ2 947 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 GPR152Q8TDT2 470 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 GIPC2Q8TF65 315 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 MYLPFQ96A32 169 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 PCED1BQ96HM7 432 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 FUBP3Q96I24 572 aaKnown RBP eCLIP16.78■□□□□ 0.28
ACTB-206ENST00000443528 IMPG2Q9BZV3 1241 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 KCNK12Q9HB15 430 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 ZNF334Q9HCZ1 680 aaPredicted RBP16.78■□□□□ 0.28
ACTB-206ENST00000443528 ASAH2Q9NR71 780 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 TRIOO75962 3097 aa16.78■□□□□ 0.28
ACTB-206ENST00000443528 ZNF197O14709 1029 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 MICAL2O94851 1124 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 MYL4P12829 197 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 MAPRE1Q15691 268 aaKnown RBP16.77■□□□□ 0.28
ACTB-206ENST00000443528 DDR2Q16832 855 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 CYP4A22Q5TCH4 519 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 SDHAF4Q5VUM1 108 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 C4orf50Q6ZRC1 276 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 TRIM59Q8IWR1 403 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 LEMD2Q8NC56 503 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 B3GALNT2Q8NCR0 500 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 STKLD1Q8NE28 680 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 ST13P5Q8NFI4 369 aaPredicted RBP16.77■□□□□ 0.28
ACTB-206ENST00000443528 RSAD2Q8WXG1 361 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 NIF3L1Q9GZT8 377 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 MAGEC2Q9UBF1 373 aaPredicted RBP16.77■□□□□ 0.28
ACTB-206ENST00000443528 HMGXB4Q9UGU5 601 aa16.77■□□□□ 0.28
ACTB-206ENST00000443528 ZFP37Q9Y6Q3 630 aaPredicted RBP16.77■□□□□ 0.28
ACTB-206ENST00000443528 DOCK8Q8NF50 2099 aa16.76■□□□□ 0.27
ACTB-206ENST00000443528 ANHXE9PGG2 379 aa16.76■□□□□ 0.27
ACTB-206ENST00000443528 GNA14O95837 355 aa16.76■□□□□ 0.27
ACTB-206ENST00000443528 MBD3O95983 291 aa16.76■□□□□ 0.27
ACTB-206ENST00000443528 GJA1P17302 382 aa16.76■□□□□ 0.27
ACTB-206ENST00000443528 BDNFP23560 247 aa16.76■□□□□ 0.27
ACTB-206ENST00000443528 MAGEA11P43364 429 aa16.76■□□□□ 0.27
ACTB-206ENST00000443528 FMO5P49326 533 aa16.76■□□□□ 0.27
ACTB-206ENST00000443528 NDST1P52848 882 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms