RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SUV39H1O43463 412 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 STRNO43815 780 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 NPPAP01160 153 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 C6orf222P0C671 652 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 TOP1P11387 765 aaKnown RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 SCG2P13521 617 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 PHKG2P15735 406 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 PDGFRAP16234 1089 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 CNGA1P29973 690 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 ACADSBP45954 432 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 SLC12A2P55011 1212 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 TGFB2P61812 414 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 MPP1Q00013 466 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 PIN1Q13526 163 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 IDI1Q13907 227 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 SPCS2Q15005 226 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 CCNG2Q16589 344 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 CFAP221Q4G0U5 840 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 KRTCAP3Q53RY4 240 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 BEND6Q5SZJ8 279 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 TEX35Q5T0J7 233 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 AADACL4Q5VUY2 407 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 TWF2Q6IBS0 349 aaKnown RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 LIN54Q6MZP7 749 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 NEPROQ6NW34 567 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 UNC5AQ6ZN44 842 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 CAND1Q86VP6 1230 aaKnown RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 COLGALT2Q8IYK4 626 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 MAB21L3Q8N8X9 362 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 IL17RDQ8NFM7 739 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 ADAMTS17Q8TE56 1095 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 SSH3Q8TE77 659 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 DENND1AQ8TEH3 1009 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 NOC3LQ8WTT2 800 aaKnown RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 SGK3Q96BR1 496 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 ZDHHC15Q96MV8 337 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 C8orf49Q96NF6 230 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 CCT7Q99832 543 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 DESI2Q9BSY9 194 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 CCDC106Q9BWC9 280 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 EIF2AQ9BY44 585 aaKnown RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 FAM107BQ9H098 131 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 INTS2Q9H0H0 1204 aaKnown RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 VPS11Q9H270 941 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 ZSCAN16Q9H4T2 348 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 PANK3Q9H999 370 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 KIF9Q9HAQ2 790 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 XAB2Q9HCS7 855 aaKnown RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 NTMQ9P121 344 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 TEKT2Q9UIF3 430 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 L1RE1Q9UN81 338 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 SF3B6Q9Y3B4 125 aaKnown RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 RWDD3Q9Y3V2 267 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 CHTOPQ9Y3Y2 248 aaKnown RBP5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 HECW1Q76N89 1606 aa5.08□□□□□ -1.6
HMGB3P9-201ENST00000441799 ARHGEF40Q8TER5 1519 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 NCOA1Q15788 1441 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 A0A087WZG4 1122 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 A0A0G2JPF8 293 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 E2F8A0AVK6 867 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 ARHGAP10A1A4S6 786 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 CCDC69A6NI79 296 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 HNRNPCL3B7ZW38 293 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 EBAG9O00559 213 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 HAT1O14929 419 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 AREL1O15033 823 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 FYB1O15117 783 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 MAPK13O15264 365 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 CYP27B1O15528 508 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 RANBP6O60518 1105 aaKnown RBP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 TOM1O60784 492 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 DKC1O60832 514 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 DGKIO75912 1065 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 ECDO95905 644 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 PLATP00750 562 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 PENKP01210 267 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 FSHBP01225 129 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 CD4P01730 458 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 THEGLP0DJG4 465 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 HNRNPCL4P0DMR1 293 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 CDK4P11802 303 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 CKBP12277 381 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 TMEM11P17152 192 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 SFPQP23246 707 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 ANXA13P27216 316 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 ABCG1P45844 678 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 SULT1E1P49888 294 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 RARSP54136 660 aaKnown RBP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 POU4F1Q01851 419 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 SMAD4Q13485 552 aaKnown RBP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 MTX1Q13505 466 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 CCDC38Q502W7 563 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 CEP55Q53EZ4 464 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 KCNT1Q5JUK3 1230 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 ZBTB41Q5SVQ8 909 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 WLSQ5T9L3 541 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 RNASEH2BQ5TBB1 312 aaKnown RBP5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 OR7E24Q6IFN5 339 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 TMEM53Q6P2H8 277 aa5.07□□□□□ -1.6
HMGB3P9-201ENST00000441799 FAM173BQ6P4H8 233 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms