RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 STILQ15468 1287 aa22.39■■□□□ 1.18
VPS13B-204ENST00000441350 USP41Q3LFD5 358 aa22.39■■□□□ 1.18
VPS13B-204ENST00000441350 PPP1R26Q5T8A7 1209 aaPredicted RBP22.39■■□□□ 1.18
VPS13B-204ENST00000441350 LCLAT1Q6UWP7 414 aa22.39■■□□□ 1.18
VPS13B-204ENST00000441350 TRIM72Q6ZMU5 477 aa22.39■■□□□ 1.18
VPS13B-204ENST00000441350 DDX53Q86TM3 631 aaKnown RBP22.39■■□□□ 1.18
VPS13B-204ENST00000441350 CEP57Q86XR8 500 aa22.39■■□□□ 1.18
VPS13B-204ENST00000441350 ACRBPQ8NEB7 543 aa22.39■■□□□ 1.18
VPS13B-204ENST00000441350 PKMYT1Q99640 499 aa22.39■■□□□ 1.18
VPS13B-204ENST00000441350 SEPT11Q9NVA2 429 aaKnown RBP22.39■■□□□ 1.18
VPS13B-204ENST00000441350 GBF1Q92538 1859 aa22.39■■□□□ 1.18
VPS13B-204ENST00000441350 LINC01553A4QN01 128 aa22.39■■□□□ 1.17
VPS13B-204ENST00000441350 SOD2P04179 222 aa22.39■■□□□ 1.17
VPS13B-204ENST00000441350 CYP1A1P04798 512 aaPredicted RBP22.39■■□□□ 1.17
VPS13B-204ENST00000441350 SSTR3P32745 418 aaPredicted RBP22.39■■□□□ 1.17
VPS13B-204ENST00000441350 BMP8BP34820 402 aa22.39■■□□□ 1.17
VPS13B-204ENST00000441350 SPA17Q15506 151 aa22.39■■□□□ 1.17
VPS13B-204ENST00000441350 CLEC16AQ2KHT3 1053 aa22.39■■□□□ 1.17
VPS13B-204ENST00000441350 INTS6LQ5JSJ4 861 aaKnown RBP22.39■■□□□ 1.17
VPS13B-204ENST00000441350 ALKBH5Q6P6C2 394 aaKnown RBP22.39■■□□□ 1.17
VPS13B-204ENST00000441350 FAM171BQ6P995 826 aa22.39■■□□□ 1.17
VPS13B-204ENST00000441350 KIAA1524Q8TCG1 905 aa22.39■■□□□ 1.17
VPS13B-204ENST00000441350 CYFIP2Q96F07 1278 aa22.39■■□□□ 1.17
VPS13B-204ENST00000441350 LHX5Q9H2C1 402 aa22.39■■□□□ 1.17
VPS13B-204ENST00000441350 FAM49BQ9NUQ9 324 aa22.39■■□□□ 1.17
VPS13B-204ENST00000441350 MYBPHLA2RUH7 354 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 TBC1D4O60343 1298 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 IPO7O95373 1038 aaKnown RBP22.38■■□□□ 1.17
VPS13B-204ENST00000441350 UNGP13051 313 aaPredicted RBP22.38■■□□□ 1.17
VPS13B-204ENST00000441350 MYOGP15173 224 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 CDH5P33151 784 aaPredicted RBP22.38■■□□□ 1.17
VPS13B-204ENST00000441350 BMPR1AP36894 532 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 PLCB3Q01970 1234 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 CCDC142Q17RM4 750 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 MYCBPAPQ8TBZ2 947 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 HERC2P3Q9BVR0 1158 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 PDCL3Q9H2J4 239 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 TAS2R14Q9NYV8 317 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 PCDHA11Q9Y5I1 949 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 NLRC5Q86WI3 1866 aa22.38■■□□□ 1.17
VPS13B-204ENST00000441350 FGF18O76093 207 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 MICAL2O94851 1124 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 LSM8O95777 96 aaKnown RBP22.37■■□□□ 1.17
VPS13B-204ENST00000441350 CCDC130P13994 396 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 KRT83P78385 493 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 MDH1BQ5I0G3 518 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 CCDC122Q5T0U0 273 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 ZNF280DQ6N043 979 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 DENND1BQ6P3S1 775 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 ANKS3Q6ZW76 656 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 FUKQ8N0W3 1084 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 WDTC1Q8N5D0 677 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 TMEM209Q96SK2 561 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 HNRNPABQ99729 332 aaKnown RBP22.37■■□□□ 1.17
VPS13B-204ENST00000441350 GTF3C4Q9UKN8 822 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 TSPAN16Q9UKR8 245 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 RWDD3Q9Y3V2 267 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 PCDHA13Q9Y5I0 950 aa22.37■■□□□ 1.17
VPS13B-204ENST00000441350 OR6C75A6NL08 312 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 H7C4K7 107 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 ARHGEF15O94989 841 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 CCDC175P0C221 793 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 NOMO3P69849 1222 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 TSPY1Q01534 308 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 CTXN3Q4LDR2 81 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 PKDCCQ504Y2 493 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 C10orf76Q5T2E6 689 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 LRRTM3Q86VH5 581 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 PASD1Q8IV76 773 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 KLHL23Q8NBE8 558 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 SLC2A14Q8TDB8 520 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 PIK3R5Q8WYR1 880 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 PLVAPQ9BX97 442 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 OXCT2Q9BYC2 517 aaPredicted RBP22.36■■□□□ 1.17
VPS13B-204ENST00000441350 ZCWPW1Q9H0M4 648 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 ISCUQ9H1K1 167 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 STK39Q9UEW8 545 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 PPP2R2CQ9Y2T4 447 aa22.36■■□□□ 1.17
VPS13B-204ENST00000441350 RTN2O75298 545 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 MAGEA1P43355 309 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 DSG1Q02413 1049 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 CENPCQ03188 943 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 KRT17Q04695 432 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 GOLGA7BQ2TAP0 167 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 PAQR9Q6ZVX9 377 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 TTC30AQ86WT1 665 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 PCED1BQ96HM7 432 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 B3GNT5Q9BYG0 378 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 ZNF518BQ9C0D4 1074 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 KCND1Q9NSA2 647 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.35■■□□□ 1.17
VPS13B-204ENST00000441350 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.35■■□□□ 1.17
VPS13B-204ENST00000441350 TMCO5BA8MYB1 307 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 CA3P07451 260 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 MAPRE1Q15691 268 aaKnown RBP22.35■■□□□ 1.17
VPS13B-204ENST00000441350 NAA35Q5VZE5 725 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 ACAD10Q6JQN1 1059 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 PRSS55Q6UWB4 352 aaPredicted RBP22.35■■□□□ 1.17
VPS13B-204ENST00000441350 ANKRD52Q8NB46 1076 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 TMEM35BQ8NCS4 154 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 274.9 ms