RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 DHX40Q8IX18 779 aaKnown RBP18.92■□□□□ 0.62
CCDC188-201ENST00000439765 ATAD1Q8NBU5 361 aa18.92■□□□□ 0.62
CCDC188-201ENST00000439765 SMYD3Q9H7B4 428 aa18.92■□□□□ 0.62
CCDC188-201ENST00000439765 IGSF9Q9P2J2 1179 aa18.92■□□□□ 0.62
CCDC188-201ENST00000439765 YIPF1Q9Y548 306 aa18.92■□□□□ 0.62
CCDC188-201ENST00000439765 SMTNL1A8MU46 457 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 STAU1O95793 577 aaKnown RBP18.91■□□□□ 0.62
CCDC188-201ENST00000439765 HLA-DRAP01903 254 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 AVPR2P30518 371 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 NTHL1P78549 312 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 MYL5Q02045 173 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 TWF1Q12792 350 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 TDGQ13569 410 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 ZNF667Q5HYK9 610 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 GET4Q7L5D6 327 aaPredicted RBP18.91■□□□□ 0.62
CCDC188-201ENST00000439765 LRRTM3Q86VH5 581 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 AOPEPQ8N6M6 819 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 TAS1R2Q8TE23 839 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 MRPL45Q9BRJ2 306 aaKnown RBP18.91■□□□□ 0.62
CCDC188-201ENST00000439765 PI4K2AQ9BTU6 479 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 KCNK12Q9HB15 430 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 ABI2Q9NYB9 513 aaPredicted RBP18.91■□□□□ 0.62
CCDC188-201ENST00000439765 EPS15L1Q9UBC2 864 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 ARMCX3Q9UH62 379 aaPredicted RBP18.91■□□□□ 0.62
CCDC188-201ENST00000439765 SLC27A5Q9Y2P5 690 aa18.91■□□□□ 0.62
CCDC188-201ENST00000439765 BECN2A8MW95 431 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 SOAT2O75908 522 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 RAP1GAPP47736 663 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 LHX1P48742 406 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 MXI1P50539 228 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 NUBP1P53384 320 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 PTPN5P54829 565 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 PSMC1P62191 440 aaKnown RBP18.9■□□□□ 0.62
CCDC188-201ENST00000439765 ENPEPQ07075 957 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 NCAPHQ15003 741 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 CCDC40Q4G0X9 1142 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 INTS6LQ5JSJ4 861 aaKnown RBP18.9■□□□□ 0.62
CCDC188-201ENST00000439765 SPOPLQ6IQ16 392 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 LIMS2Q7Z4I7 341 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 RNF214Q8ND24 703 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 CEP63Q96MT8 703 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 SEPT5Q99719 369 aaPredicted RBP18.9■□□□□ 0.62
CCDC188-201ENST00000439765 RBSNQ9H1K0 784 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 TMEM8AQ9HCN3 771 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 TMLHEQ9NVH6 421 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 DUSP12Q9UNI6 340 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 OBSL1O75147 1896 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 GABRDO14764 452 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 LMO2P25791 158 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 PCSK1P29120 753 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 TCF15Q12870 199 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 TPD52L1Q16890 204 aaPredicted RBP18.9■□□□□ 0.62
CCDC188-201ENST00000439765 RTL10Q7L3V2 364 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 DPH6Q7L8W6 267 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 LUZP1Q86V48 1076 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 DCP1BQ8IZD4 617 aaKnown RBP18.9■□□□□ 0.62
CCDC188-201ENST00000439765 SPATA18Q8TC71 538 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 SYT15Q9BQS2 421 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 ACBD6Q9BR61 282 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 IMPG2Q9BZV3 1241 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 VRTNQ9H8Y1 702 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 MAFFQ9ULX9 164 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 NFE2L3Q9Y4A8 694 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 MYH10P35580 1976 aa18.9■□□□□ 0.62
CCDC188-201ENST00000439765 MIA3Q5JRA6 1907 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 ATP2C2O75185 946 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 ASS1P00966 412 aaKnown RBP18.89■□□□□ 0.61
CCDC188-201ENST00000439765 POU2F2P09086 479 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 PDGFRBP09619 1106 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 WARSP23381 471 aaKnown RBP18.89■□□□□ 0.61
CCDC188-201ENST00000439765 GBP2P32456 591 aaPredicted RBP18.89■□□□□ 0.61
CCDC188-201ENST00000439765 CDH8P55286 799 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 NOP14P78316 857 aaKnown RBP18.89■□□□□ 0.61
CCDC188-201ENST00000439765 SGSM1Q2NKQ1 1148 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 MGAT5BQ3V5L5 792 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 PABPC1LQ4VXU2 614 aaKnown RBP18.89■□□□□ 0.61
CCDC188-201ENST00000439765 KRT39Q6A163 491 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 OR6B3Q8NGW1 331 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 MYADMQ96S97 322 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 SRRTQ9BXP5 876 aaKnown RBP18.89■□□□□ 0.61
CCDC188-201ENST00000439765 SNX25Q9H3E2 840 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.89■□□□□ 0.61
CCDC188-201ENST00000439765 DNMT3BQ9UBC3 853 aaKnown RBP18.89■□□□□ 0.61
CCDC188-201ENST00000439765 GTF3C4Q9UKN8 822 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 NME7Q9Y5B8 376 aa18.89■□□□□ 0.61
CCDC188-201ENST00000439765 GREB1Q4ZG55 1949 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 STX10O60499 249 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 LRRN2O75325 713 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 FSHRP23945 695 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 GTF2H1P32780 548 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 CBWD6Q4V339 395 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 CBWD3Q5JTY5 395 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 CBWD5Q5RIA9 395 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 ELMOD1Q8N336 334 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 NXPE3Q969Y0 559 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 SLC35C1Q96A29 364 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 PKMYT1Q99640 499 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 CORO1BQ9BR76 489 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 SDCBP2Q9H190 292 aa18.88■□□□□ 0.61
CCDC188-201ENST00000439765 CEP72Q9P209 647 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms