RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 OR8H2Q8N162 312 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 DPP10Q8N608 796 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 GLT1D1Q96MS3 346 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 PGLYRP2Q96PD5 576 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 OLFM1Q99784 485 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 MRPS26Q9BYN8 205 aaKnown RBP19.22■□□□□ 0.67
SHANK3-202ENST00000414786 UBTFL6P0CB48 400 aaPredicted RBP19.22■□□□□ 0.67
SHANK3-202ENST00000414786 RGS2P41220 211 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 HIRAP54198 1017 aaPredicted RBP19.22■□□□□ 0.67
SHANK3-202ENST00000414786 EIF2B5Q13144 721 aaKnown RBP19.22■□□□□ 0.67
SHANK3-202ENST00000414786 VSTM4Q8IW00 320 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 SERAC1Q96JX3 654 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 TRABDQ9H4I3 376 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 RNF14Q9UBS8 474 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 ITGB3P05106 788 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 LTKP29376 864 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 MAP4K1Q92918 833 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 FBXO32Q969P5 355 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 RHOBTB2Q9BYZ6 727 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 SOHLH2Q9NX45 425 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 TRAPPC8Q9Y2L5 1435 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 SKIV2L2P42285 1042 aaKnown RBP19.22■□□□□ 0.67
SHANK3-202ENST00000414786 EFEMP1Q12805 493 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 DGKDQ16760 1214 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 TSPAN17Q96FV3 270 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 APOL2Q9BQE5 337 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 WDCPQ9H6R7 721 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 OLFML3Q9NRN5 406 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 SMPD4Q9NXE4 827 aa19.22■□□□□ 0.67
SHANK3-202ENST00000414786 UTYO14607 1347 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 VCLP18206 1134 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 TSPOAP1O95153 1857 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.21■□□□□ 0.67
SHANK3-202ENST00000414786 M0R3G1 203 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 ATP6V1B1P15313 513 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 SERPINB5P36952 375 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 HALP42357 657 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 DCP1BQ8IZD4 617 aaKnown RBP19.21■□□□□ 0.67
SHANK3-202ENST00000414786 PRPF18Q99633 342 aaKnown RBP19.21■□□□□ 0.67
SHANK3-202ENST00000414786 DEAF1O75398 565 aaPredicted RBP19.21■□□□□ 0.67
SHANK3-202ENST00000414786 TFE3P19532 575 aaPredicted RBP19.21■□□□□ 0.67
SHANK3-202ENST00000414786 TCEA1P23193 301 aaKnown RBP19.21■□□□□ 0.67
SHANK3-202ENST00000414786 STX3Q13277 289 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 CALML6Q8TD86 181 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 OSBPL9Q96SU4 736 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 SH3GL3Q99963 347 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 SCN3BQ9NY72 215 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 C17orf102A2RUQ5 167 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 CBX4O00257 560 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 EIF2S1P05198 315 aaKnown RBP19.21■□□□□ 0.67
SHANK3-202ENST00000414786 CDH2P19022 906 aaPredicted RBP19.21■□□□□ 0.67
SHANK3-202ENST00000414786 GRK3P35626 688 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 ZSWIM7Q19AV6 140 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 IQCF2Q8IXL9 164 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 C9orf72Q96LT7 481 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 PLA2G4CQ9UP65 541 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 TRIM43BA6NCK2 446 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 CSDE1O75534 798 aaKnown RBP19.21■□□□□ 0.67
SHANK3-202ENST00000414786 B3GAT3O94766 335 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 RAP1GAPP47736 663 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 PPP2R2AP63151 447 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 SV2CQ496J9 727 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 RDM1Q8NG50 284 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 UBP1Q9NZI7 540 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 PARD3Q8TEW0 1356 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 MT-CO1P00395 513 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 CSF1RP07333 972 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 SGCGQ13326 291 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 ZC2HC1CQ53FD0 456 aaPredicted RBP19.21■□□□□ 0.67
SHANK3-202ENST00000414786 C2CD6Q53TS8 623 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 CYFIP2Q96F07 1278 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 VPS28Q9UK41 221 aa19.21■□□□□ 0.67
SHANK3-202ENST00000414786 ATF7IP2Q5U623 682 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 AGPAT1Q99943 283 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 PCDHGA3Q9Y5H0 932 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 DCDC2CA8MYV0 355 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 UCMAQ8WVF2 138 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 SNRNP27Q8WVK2 155 aaKnown RBP19.2■□□□□ 0.66
SHANK3-202ENST00000414786 DYRK1BQ9Y463 629 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 M0QYT0 321 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 EPHB2P29323 1055 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 GOLPH3LQ9H4A5 285 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 RRAGCQ9HB90 399 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 RPRD2Q5VT52 1461 aaKnown RBP19.2■□□□□ 0.66
SHANK3-202ENST00000414786 EPHX4Q8IUS5 362 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 FAM71DQ8N9W8 422 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 SNX6Q9UNH7 406 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 SMARCAL1Q9NZC9 954 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 TRIM13O60858 407 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 ITGA3P26006 1051 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 COG2Q14746 738 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 CENPLQ8N0S6 344 aaPredicted RBP19.2■□□□□ 0.66
SHANK3-202ENST00000414786 VPS37AQ8NEZ2 397 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 TPD52L3Q96J77 140 aa19.2■□□□□ 0.66
SHANK3-202ENST00000414786 RUVBL2Q9Y230 463 aaKnown RBP19.2■□□□□ 0.66
SHANK3-202ENST00000414786 MTHFD1LQ6UB35 978 aa19.19■□□□□ 0.66
SHANK3-202ENST00000414786 CPA4Q9UI42 421 aa19.19■□□□□ 0.66
SHANK3-202ENST00000414786 TIMM13Q9Y5L4 95 aaPredicted RBP19.19■□□□□ 0.66
SHANK3-202ENST00000414786 MTFR1Q15390 333 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms