RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 UBN1Q9NPG3 1134 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 SAE1Q9UBE0 346 aaPredicted RBP16.73■□□□□ 0.27
HOXD3-202ENST00000410016 SHOC2Q9UQ13 582 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 EFR3BQ9Y2G0 817 aa16.73■□□□□ 0.27
HOXD3-202ENST00000410016 FARP1Q9Y4F1 1045 aaPredicted RBP16.73■□□□□ 0.27
HOXD3-202ENST00000410016 CFAP73A6NFT4 308 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 MAGEB2O15479 319 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 B4GALT4O60513 344 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 MARK3P27448 753 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 PSMC4P43686 418 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 HIRAP54198 1017 aaPredicted RBP16.72■□□□□ 0.27
HOXD3-202ENST00000410016 SLC18A1P54219 525 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 ZNF699Q32M78 642 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 HSDL1Q3SXM5 330 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 TRIM50Q86XT4 487 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 DHX37Q8IY37 1157 aaKnown RBP16.72■□□□□ 0.27
HOXD3-202ENST00000410016 GBP7Q8N8V2 638 aaPredicted RBP16.72■□□□□ 0.27
HOXD3-202ENST00000410016 JOSD2Q8TAC2 188 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 FAM167AQ96KS9 214 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 RMDN2Q96LZ7 410 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 LHX5Q9H2C1 402 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 SNCAIPQ9Y6H5 919 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 PRPF4O43172 522 aaKnown RBP eCLIP16.72■□□□□ 0.27
HOXD3-202ENST00000410016 LRCH4O75427 683 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 PLCB3Q01970 1234 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 PKN2Q16513 984 aaKnown RBP16.72■□□□□ 0.27
HOXD3-202ENST00000410016 TAZQ16635 292 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 WLSQ5T9L3 541 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 SMYD5Q6GMV2 418 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 TBC1D1Q86TI0 1168 aaPredicted RBP16.72■□□□□ 0.27
HOXD3-202ENST00000410016 ZBED8Q8IZ13 594 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 CEP120Q8N960 986 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 TCP11Q8WWU5 503 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 GPR20Q99678 358 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 PLCD4Q9BRC7 762 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 KIF9Q9HAQ2 790 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 RXFP1Q9HBX9 757 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 STRIP2Q9ULQ0 834 aa16.72■□□□□ 0.27
HOXD3-202ENST00000410016 POC1B-GALNT4F8VUJ3 575 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 SGK1O00141 431 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 SOCS7O14512 581 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 SPAG7O75391 227 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 IFNB1P01574 187 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 KRT3P12035 628 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 IL9RQ01113 521 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 RASA2Q15283 850 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 MPZL3Q6UWV2 235 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 ZBTB8OSQ8IWT0 167 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 THNSL1Q8IYQ7 743 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 ANKLE1Q8NAG6 615 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 FNIP1Q8TF40 1166 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 SPATC1LQ9H0A9 340 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 FZD8Q9H461 694 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 POLIQ9UNA4 740 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 CEP83Q9Y592 693 aa16.71■□□□□ 0.27
HOXD3-202ENST00000410016 BRCA1P38398 1863 aaKnown RBP16.71■□□□□ 0.27
HOXD3-202ENST00000410016 ACKR2O00590 384 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 GAS2O43903 313 aaKnown RBP16.71■□□□□ 0.26
HOXD3-202ENST00000410016 LGR5O75473 907 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 ATP6V1G2O95670 118 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 PSMA2P25787 234 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 BAG6P46379 1132 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 GDF10P55107 478 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 GPX6P59796 221 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 YWHAEP62258 255 aaKnown RBP16.71■□□□□ 0.26
HOXD3-202ENST00000410016 KCNJ2P63252 427 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 RIPK1Q13546 671 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 ACVR2BQ13705 512 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 VGLL4Q14135 290 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 ZNF268Q14587 947 aaPredicted RBP16.71■□□□□ 0.26
HOXD3-202ENST00000410016 SMTNL2Q2TAL5 461 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 PREPLQ4J6C6 727 aaPredicted RBP16.71■□□□□ 0.26
HOXD3-202ENST00000410016 KCNT1Q5JUK3 1230 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 RNF43Q68DV7 783 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 CENPUQ71F23 418 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 ACTL9Q8TC94 416 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 CNKSR2Q8WXI2 1034 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 GRAMD1AQ96CP6 724 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 PITPNM3Q9BZ71 974 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 TRABDQ9H4I3 376 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 ECT2Q9H8V3 914 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 PNMA3Q9UL41 463 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 PPP2R3BQ9Y5P8 575 aa16.71■□□□□ 0.26
HOXD3-202ENST00000410016 GOLGA8SH3BPF8 625 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 B4GALT5O43286 388 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 GJB1P08034 283 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 GSCP56915 257 aaPredicted RBP16.7■□□□□ 0.26
HOXD3-202ENST00000410016 OSTNP61366 133 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 LACTBP83111 547 aaPredicted RBP16.7■□□□□ 0.26
HOXD3-202ENST00000410016 OTUD4Q01804 1114 aaKnown RBP16.7■□□□□ 0.26
HOXD3-202ENST00000410016 GAD2Q05329 585 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 PDIA2Q13087 525 aaKnown RBP16.7■□□□□ 0.26
HOXD3-202ENST00000410016 EEF1DP3Q658K8 133 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 NCAPG2Q86XI2 1143 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 RHPN2Q8IUC4 686 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 C10orf88Q9H8K7 445 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 NXF1Q9UBU9 619 aaKnown RBP16.7■□□□□ 0.26
HOXD3-202ENST00000410016 SIX4Q9UIU6 781 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 GRID1Q9ULK0 1009 aa16.7■□□□□ 0.26
HOXD3-202ENST00000410016 CLUHO75153 1309 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 415.4 ms