RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 INHBAP08476 426 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 GDF10P55107 478 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 PPP2R5DQ14738 602 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 MTDHQ86UE4 582 aaKnown RBP13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 SPATA18Q8TC71 538 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 P3H4Q92791 437 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 CDHR1Q96JP9 859 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 GMLQ99445 158 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 PSTPIP1O43586 416 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 MTA2O94776 668 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 TBXAS1P24557 533 aaPredicted RBP13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 TAF11Q15544 211 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 ANKRD20A3Q5VUR7 823 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 LONP2Q86WA8 852 aa13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 AVENQ9NQS1 362 aaPredicted RBP13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 NOP53Q9NZM5 478 aaKnown RBP13.32□□□□□ -0.28
PPP4R1-202ENST00000400555 NHSQ6T4R5 1651 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 DNALI1O14645 258 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 PLSCR1O15162 318 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 LDHAP00338 332 aaKnown RBP13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 EDN1P05305 212 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 CALB1P05937 261 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 CXCL8P10145 99 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 GHRP10912 638 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 CAPSQ13938 189 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 LACTB2Q53H82 288 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 TFDP3Q5H9I0 405 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 ZNF667Q5HYK9 610 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 GJC2Q5T442 439 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 MCUR1Q96AQ8 359 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 FAF2Q96CS3 445 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 MAGEB18Q96M61 343 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 PIM2Q9P1W9 311 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 ZFP69BQ9UJL9 534 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 SLX4Q8IY92 1834 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 COL24A1Q17RW2 1714 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 SRRM3A6NNA2 597 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 MCF2LO15068 1137 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 EPHB2P29323 1055 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 ARL4CP56559 192 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 PREPLQ4J6C6 727 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 SESTD1Q86VW0 696 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 SULF1Q8IWU6 871 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 AGBL3Q8NEM8 1001 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 COPS5Q92905 334 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 ARHGAP28Q9P2N2 729 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 TROVE2P10155 538 aaKnown RBP eCLIP13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 RXRBP28702 533 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 POLR2BP30876 1174 aaKnown RBP13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 MFSD5Q6N075 450 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 CRELD2Q6UXH1 353 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 ANKRD36BP1Q96IX9 119 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 FAM111AQ96PZ2 611 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 ADPGKQ9BRR6 497 aa13.31□□□□□ -0.28
PPP4R1-202ENST00000400555 ATP2A2P16615 1042 aaKnown RBP13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 PHBP35232 272 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 RAD23BP54727 409 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 SNRPFP62306 86 aaKnown RBP13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 AMHR2Q16671 573 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 TAF1BQ53T94 588 aaPredicted RBP13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 DALRD3Q5D0E6 543 aaKnown RBP13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 SPDYCQ5MJ68 293 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 SH3PXD2AQ5TCZ1 1133 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 ABHD15Q6UXT9 468 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 TRIM72Q6ZMU5 477 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 SYDE1Q6ZW31 735 aaPredicted RBP13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 LRRC6Q86X45 466 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 UNC45BQ8IWX7 931 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 KATNAL2Q8IYT4 538 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 RILPQ96NA2 401 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 NUDCD1Q96RS6 583 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 CGRRF1Q99675 332 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 RAB6BQ9NRW1 208 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 FAM49BQ9NUQ9 324 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 AKT3Q9Y243 479 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 TCRBV7S3A2A0A539 114 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 CFAP73A6NFT4 308 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 APRTP07741 180 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 TMEM62Q0P6H9 643 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 ZNF677Q86XU0 584 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 TMEM192Q8IY95 271 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 TCP10LQ8TDR4 215 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 MRPL4Q9BYD3 311 aaKnown RBP13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 NIF3L1Q9GZT8 377 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 ST6GALNAC4Q9H4F1 302 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 RXFP1Q9HBX9 757 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 SLC17A7Q9P2U7 560 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 BHMG1C9JSJ3 638 aaPredicted RBP13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 TP73O15350 636 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 ITGB3P05106 788 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 PTPRAP18433 802 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 ATP4AP20648 1035 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 ACO1P21399 889 aaKnown RBP13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 VCPP55072 806 aaKnown RBP13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 BMPR2Q13873 1038 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 C15orf59Q2T9L4 293 aaPredicted RBP13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 EEF1DP3Q658K8 133 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 ZCCHC9Q8N567 271 aaKnown RBP13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 PAFAH2Q99487 392 aa13.3□□□□□ -0.28
PPP4R1-202ENST00000400555 C17orf75Q9HAS0 396 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms