RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 GCNT4Q9P109 453 aa31.36■■■□□ 2.61
CHCHD4-202ENST00000396914 VNN2O95498 520 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 TRIM21P19474 475 aaKnown RBP31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 ALDH1A3P47895 512 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 NDST1P52848 882 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 TWF1Q12792 350 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 ORC1Q13415 861 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 CBX2Q14781 532 aaPredicted RBP31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 MAPRE1Q15691 268 aaKnown RBP31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 VWA3BQ502W6 1294 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 MDH1BQ5I0G3 518 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 ELMOD1Q8N336 334 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 TTC9BQ8N6N2 239 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 EHBP1Q8NDI1 1231 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 ANKRD20A12PQ8NF67 263 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 CRACR2AQ9BSW2 395 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 INTS2Q9H0H0 1204 aaKnown RBP31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 CRISPLD1Q9H336 500 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 TAB2Q9NYJ8 693 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 YIPF1Q9Y548 306 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 NME7Q9Y5B8 376 aa31.35■■■□□ 2.61
CHCHD4-202ENST00000396914 SMTNL1A8MU46 457 aa31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 PTPN1P18031 435 aaKnown RBP31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 HOXA9P31269 272 aa31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 TJAP1Q5JTD0 557 aa31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 CDKAL1Q5VV42 579 aa31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 C4orf50Q6ZRC1 276 aa31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 ZNF707Q96C28 371 aaPredicted RBP31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 TNIP3Q96KP6 325 aa31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 NECTIN4Q96NY8 510 aa31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 BPIFA3Q9BQP9 254 aa31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 NDST4Q9H3R1 872 aa31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 CRTAC1Q9NQ79 661 aa31.34■■■□□ 2.61
CHCHD4-202ENST00000396914 BECN2A8MW95 431 aa31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 SOAT2O75908 522 aa31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 TUFMP49411 452 aaKnown RBP31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 SMAD2Q15796 467 aaKnown RBP31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 ACOT1Q86TX2 421 aa31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 PPM1KQ8N3J5 372 aa31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 B3GALNT2Q8NCR0 500 aa31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 FAM200AQ8TCP9 573 aa31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 MYLPFQ96A32 169 aa31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 ARID3AQ99856 593 aa31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 LPIN3Q9BQK8 851 aa31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 DNAI2Q9GZS0 605 aa31.33■■■□□ 2.61
CHCHD4-202ENST00000396914 EPHB3P54753 998 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 PLD1Q13393 1074 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 CUL2Q13617 745 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 FAM171BQ6P995 826 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 CYP26C1Q6V0L0 522 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 GBP6Q6ZN66 633 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 MYCBPAPQ8TBZ2 947 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 SUSD6Q92537 303 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 FAXDC2Q96IV6 333 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 PKMYT1Q99640 499 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 VPS16Q9H269 839 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 HMGXB4Q9UGU5 601 aa31.32■■■□□ 2.61
CHCHD4-202ENST00000396914 UNC80Q8N2C7 3258 aa31.32■■■□□ 2.6
CHCHD4-202ENST00000396914 BMP1P13497 986 aa31.32■■■□□ 2.6
CHCHD4-202ENST00000396914 TBXAS1P24557 533 aaPredicted RBP31.32■■■□□ 2.6
CHCHD4-202ENST00000396914 ZNF394Q53GI3 561 aa31.32■■■□□ 2.6
CHCHD4-202ENST00000396914 GRASPQ7Z6J2 395 aaPredicted RBP31.32■■■□□ 2.6
CHCHD4-202ENST00000396914 UNC93AQ86WB7 457 aa31.32■■■□□ 2.6
CHCHD4-202ENST00000396914 ZNF512Q96ME7 567 aaPredicted RBP31.32■■■□□ 2.6
CHCHD4-202ENST00000396914 CISHQ9NSE2 258 aa31.32■■■□□ 2.6
CHCHD4-202ENST00000396914 HAPLN1P10915 354 aaPredicted RBP31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 CYP2F1P24903 491 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 YWHAEP62258 255 aaKnown RBP31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 NCAPHQ15003 741 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 KRT31Q15323 416 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 EXOC3L4Q17RC7 722 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 IQCEQ6IPM2 695 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 TTC39CQ8N584 583 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 LMO3Q8TAP4 145 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 MED10Q9BTT4 135 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 NT5C1AQ9BXI3 368 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 RHOBTB2Q9BYZ6 727 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 POMKQ9H5K3 350 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 HSFX1Q9UBD0 423 aa31.31■■■□□ 2.6
CHCHD4-202ENST00000396914 SP100P23497 879 aaPredicted RBP31.3■■■□□ 2.6
CHCHD4-202ENST00000396914 INCA1Q0VD86 236 aa31.3■■■□□ 2.6
CHCHD4-202ENST00000396914 MIIPQ5JXC2 388 aa31.3■■■□□ 2.6
CHCHD4-202ENST00000396914 RRAGAQ7L523 313 aa31.3■■■□□ 2.6
CHCHD4-202ENST00000396914 DHX40Q8IX18 779 aaKnown RBP31.3■■■□□ 2.6
CHCHD4-202ENST00000396914 PCED1BQ96HM7 432 aa31.3■■■□□ 2.6
CHCHD4-202ENST00000396914 HCFC1R1Q9NWW0 138 aa31.3■■■□□ 2.6
CHCHD4-202ENST00000396914 VEPH1Q14D04 833 aa31.29■■■□□ 2.6
CHCHD4-202ENST00000396914 TAF12Q16514 161 aa31.29■■■□□ 2.6
CHCHD4-202ENST00000396914 SCN4BQ8IWT1 228 aa31.29■■■□□ 2.6
CHCHD4-202ENST00000396914 CORO1BQ9BR76 489 aa31.29■■■□□ 2.6
CHCHD4-202ENST00000396914 ABCB6Q9NP58 842 aa31.29■■■□□ 2.6
CHCHD4-202ENST00000396914 SPTBN5Q9NRC6 3674 aaKnown RBP31.28■■■□□ 2.6
CHCHD4-202ENST00000396914 C2orf16Q68DN1 1984 aa31.28■■■□□ 2.6
CHCHD4-202ENST00000396914 CILPO75339 1184 aa31.28■■■□□ 2.6
CHCHD4-202ENST00000396914 PTPN2P17706 415 aa31.28■■■□□ 2.6
CHCHD4-202ENST00000396914 SLC9A1P19634 815 aa31.28■■■□□ 2.6
CHCHD4-202ENST00000396914 BDNFP23560 247 aa31.28■■■□□ 2.6
CHCHD4-202ENST00000396914 NTHL1P78549 312 aa31.28■■■□□ 2.6
CHCHD4-202ENST00000396914 ARHGEF19Q8IW93 802 aa31.28■■■□□ 2.6
CHCHD4-202ENST00000396914 GIPC2Q8TF65 315 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms