RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 HIF1AQ16665 826 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 NYAP1Q6ZVC0 841 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 ASIC4Q96FT7 647 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 DDX27Q96GQ7 796 aaKnown RBP13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 C12orf42Q96LP6 360 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 FGFBP2Q9BYJ0 223 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 CARD9Q9H257 536 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 VPS11Q9H270 941 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 GPATCH2LQ9NWQ4 482 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 AIPL1Q9NZN9 384 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 ALS2Q96Q42 1657 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 S100BP04271 92 aaPredicted RBP13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 ATXN8OSP0DMR3 200 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 TNFSF9P41273 254 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 LHX1P48742 406 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 GCNT1Q02742 428 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 YWHAHQ04917 246 aaPredicted RBP13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 SNX17Q15036 470 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 IL31Q6EBC2 164 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 PGLYRP2Q96PD5 576 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 MROH7Q68CQ1 1323 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 LTBP3Q9NS15 1303 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 AXLP30530 894 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 RAB27AP51159 221 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 CCL23P55773 120 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 ASPHQ12797 758 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 TDRD10Q5VZ19 366 aaKnown RBP13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 USP38Q8NB14 1042 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 FBXO32Q969P5 355 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 TTC17Q96AE7 1141 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 WDCPQ9H6R7 721 aa13.74□□□□□ -0.21
PTPRN2-202ENST00000389416 KPNA7A9QM74 516 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 RAD51CO43502 376 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 NFKBIAP25963 317 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 ARHGAP25P42331 645 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 SCNN1GP51170 649 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 PTENP60484 403 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 RAD51Q06609 339 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 RAB44Q7Z6P3 723 aaPredicted RBP13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 ATPAF2Q8N5M1 289 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 BRI3BPQ8WY22 251 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 LENG1Q96BZ8 264 aaPredicted RBP13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 MOSPD1Q9UJG1 213 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 TNFSF13BQ9Y275 285 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 CLGNO14967 610 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 TGFB1I1O43294 461 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 CLK2P49760 499 aaKnown RBP13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 NBPF20Q3BBV1 942 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 CCDC33Q8N5R6 958 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 ZSWIM1Q9BR11 485 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 CALCAP01258 141 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 URODP06132 367 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 MLH1P40692 756 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 BTG3Q14201 252 aaPredicted RBP13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 SLC35G1Q2M3R5 365 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 HYIQ5T013 277 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 FAM171A1Q5VUB5 890 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 JAMLQ86YT9 394 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 ATP11CQ8NB49 1132 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 ZBTB10Q96DT7 871 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 DEFB118Q96PH6 123 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 STK38LQ9Y2H1 464 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 RGPD1P0DJD0 1748 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 HMGB1P1B2RPK0 211 aaPredicted RBP13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 COPEO14579 308 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 SUN1O94901 812 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 LYPLA2O95372 231 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 LRG1P02750 347 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 NFICP08651 508 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 MAGOHP61326 146 aaKnown RBP13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 ZNF280DQ6N043 979 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 SLC13A5Q86YT5 568 aaPredicted RBP13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 SIAH1Q8IUQ4 282 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 FAM172AQ8WUF8 416 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 RXFP2Q8WXD0 754 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 ATG4AQ8WYN0 398 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 MTMR8Q96EF0 704 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 DDX50Q9BQ39 737 aaKnown RBP13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 TRIM56Q9BRZ2 755 aaKnown RBP13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 ZNF518BQ9C0D4 1074 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 SARS2Q9NP81 518 aaKnown RBP13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 SH3BP1Q9Y3L3 701 aa13.73□□□□□ -0.21
PTPRN2-202ENST00000389416 NFE2Q16621 373 aaPredicted RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 TAF1BQ53T94 588 aaPredicted RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 NOL9Q5SY16 702 aaKnown RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 PPTC7Q8NI37 304 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 CD99L2Q8TCZ2 262 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 RAPGEF5Q92565 580 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 ATXN7L3BQ96GX2 97 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 RBM15Q96T37 977 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 MAGEB5Q9BZ81 275 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 KANSL3Q9P2N6 904 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 G3BP2Q9UN86 482 aaKnown RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 DDX3XO00571 662 aaKnown RBP eCLIP13.72□□□□□ -0.213e-7■■■□□ 19
PTPRN2-202ENST00000389416 EPHB6O15197 1021 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 CABYRO75952 493 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 HARS2P49590 506 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms