RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 MARCH8Q5T0T0 291 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 GPR142Q7Z601 462 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 C12orf29Q8N999 325 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 CXorf38Q8TB03 319 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 HPDLQ96IR7 371 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 RAB6CQ9H0N0 254 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 PCDHGC3Q9UN70 934 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 KAT6AQ92794 2004 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 TRIP11Q15643 1979 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 GLTPD2A6NH11 291 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 TSPAN1O60635 241 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 GRAP2O75791 330 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 IFNB1P01574 187 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 CHN1P15882 459 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 CREB1P16220 341 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 PTPN11Q06124 597 aaPredicted RBP16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 ADCY1Q08828 1119 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 MTM1Q13496 603 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 TMEM132DQ14C87 1099 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 LINC01465Q8N7H1 131 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 BCO2Q9BYV7 579 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 NEU2Q9Y3R4 380 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 PLXNB2O15031 1838 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 PPEF2O14830 753 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 LIASO43766 372 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 MICAL2O94851 1124 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 MCF2P10911 925 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 MAN1A1P33908 653 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 AUHQ13825 339 aaKnown RBP16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 BYSLQ13895 437 aaKnown RBP16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 GLRA4Q5JXX5 417 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 SPDYCQ5MJ68 293 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 CAPN12Q6ZSI9 719 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 RCOR2Q8IZ40 523 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 TMEM121Q9BTD3 319 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 CDHR5Q9HBB8 845 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 VTA1Q9NP79 307 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 TBK1Q9UHD2 729 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 YWHAEP62258 255 aaKnown RBP16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 SH3PXD2AQ5TCZ1 1133 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 CYP4F22Q6NT55 531 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 OR6J1Q8NGC5 347 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 KIF12Q96FN5 646 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 TMEM176AQ96HP8 235 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 RBM41Q96IZ5 413 aaKnown RBP16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 PIWIL1Q96J94 861 aaKnown RBP16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 TRAIPQ9BWF2 469 aa16.86■□□□□ 0.29
CNKSR1-202ENST00000374253 TULP2O00295 520 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 MAGEB2O15479 319 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 CILPO75339 1184 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 LRCH4O75427 683 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 CETPP11597 493 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 CDH5P33151 784 aaPredicted RBP16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 NDST1P52848 882 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 XYLT1Q86Y38 959 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 NPLOC4Q8TAT6 608 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 LPIN3Q9BQK8 851 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 APOL6Q9BWW8 343 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 ZNF518BQ9C0D4 1074 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 ADAM7Q9H2U9 754 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 MLXIPLQ9NP71 852 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 hCG_1818297A0A087WSY0 165 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 GMNCA6NCL1 334 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 A6NNZ2 444 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 NPTXRO95502 500 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 MMP3P08254 477 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 KLRC2P26717 231 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 CETN2P41208 172 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 IFNAR2P48551 515 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 RGS7P49802 495 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 ARSEP51690 589 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 PIGHQ14442 188 aaPredicted RBP16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 GPR162Q16538 588 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 TUBB8Q3ZCM7 444 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 MGARPQ8TDB4 240 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 PGM2Q96G03 612 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 MAML3Q96JK9 1138 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 ACAP3Q96P50 834 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 PTPN18Q99952 460 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 NFKBIZQ9BYH8 718 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 DPP3Q9NY33 737 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 NINJ2Q9NZG7 142 aa16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 FEZ2Q9UHY8 353 aaPredicted RBP16.85■□□□□ 0.29
CNKSR1-202ENST00000374253 DOCK3Q8IZD9 2030 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 GOLGA8MH3BSY2 632 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 HCRTO43612 131 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 TRAPPC3O43617 180 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 TJP3O95049 919 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 CYP3A5P20815 502 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 CDKN2BP42772 138 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 GPS1Q13098 491 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 C6orf118Q5T5N4 469 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 IPO4Q8TEX9 1081 aaKnown RBP16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 HSPH1Q92598 858 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 SNTG2Q9NY99 539 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 DYNC1LI2O43237 492 aaPredicted RBP16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 MED7O43513 233 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 FAM107AO95990 144 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 NRLP54845 237 aa16.84■□□□□ 0.29
CNKSR1-202ENST00000374253 TNFAIP2Q03169 654 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms