RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 DPH6Q7L8W6 267 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 RTN4RL1Q86UN2 441 aaPredicted RBP12.81□□□□□ -0.36
USF1-203ENST00000368021 PHF13Q86YI8 300 aaPredicted RBP12.81□□□□□ -0.36
USF1-203ENST00000368021 SYCE1Q8N0S2 351 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 LRRC57Q8N9N7 239 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 TFAP2BQ92481 460 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 SEPT8Q92599 483 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 APBB2Q92870 758 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 ZSWIM1Q9BR11 485 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 ELOVL4Q9GZR5 314 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 LHX5Q9H2C1 402 aa12.81□□□□□ -0.36
USF1-203ENST00000368021 GRID2IPA4D2P6 1211 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 PALMO75781 387 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 ATP1A1P05023 1023 aaKnown RBP12.8□□□□□ -0.36
USF1-203ENST00000368021 VDRP11473 427 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 PRLRP16471 622 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 PAX3P23760 479 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 SCNN1GP51170 649 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 NDST1P52848 882 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 RABGGTBP53611 331 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 SOWAHAQ2M3V2 549 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 LRIT3Q3SXY7 679 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 NAA35Q5VZE5 725 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 FAM117BQ6P1L5 589 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.8□□□□□ -0.365e-7■■■■□ 21.8
USF1-203ENST00000368021 MON1BQ7L1V2 547 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 SLFN11Q7Z7L1 901 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 MCOLN2Q8IZK6 566 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 TOP6BLQ8N6T0 577 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 TMEM35BQ8NCS4 154 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 LINC01599Q8WXQ3 324 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 PPM1EQ8WY54 764 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 ARHGEF26Q96DR7 871 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 TWNKQ96RR1 684 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 MTIF3Q9H2K0 278 aaKnown RBP12.8□□□□□ -0.36
USF1-203ENST00000368021 AVENQ9NQS1 362 aaPredicted RBP12.8□□□□□ -0.36
USF1-203ENST00000368021 MIOSQ9NXC5 875 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 UVRAGQ9P2Y5 699 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 HMGXB4Q9UGU5 601 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 CDC23Q9UJX2 597 aa12.8□□□□□ -0.36
USF1-203ENST00000368021 ENC1O14682 589 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 SPTLC1O15269 473 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 CFHP08603 1231 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 CD19P15391 556 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 ATP2A2P16615 1042 aaKnown RBP12.79□□□□□ -0.36
USF1-203ENST00000368021 PBX2P40425 430 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 AFF1P51825 1210 aaKnown RBP12.79□□□□□ -0.36
USF1-203ENST00000368021 DEFB103AP81534 67 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 C1QBPQ07021 282 aaKnown RBP12.79□□□□□ -0.36
USF1-203ENST00000368021 STILQ15468 1287 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 CNGA2Q16280 664 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 TTC31Q49AM3 519 aaPredicted RBP12.79□□□□□ -0.36
USF1-203ENST00000368021 RASIP1Q5U651 963 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 RNF169Q8NCN4 708 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 APPL2Q8NEU8 664 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 CPA5Q8WXQ8 436 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 ZNF653Q96CK0 615 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 MRPL45Q9BRJ2 306 aaKnown RBP12.79□□□□□ -0.36
USF1-203ENST00000368021 DNAI2Q9GZS0 605 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 ELAC1Q9H777 363 aaKnown RBP12.79□□□□□ -0.36
USF1-203ENST00000368021 OSGEPQ9NPF4 335 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 SAR1BQ9Y6B6 198 aa12.79□□□□□ -0.36
USF1-203ENST00000368021 TDRD15B5MCY1 1934 aaKnown RBP12.79□□□□□ -0.36
USF1-203ENST00000368021 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.78□□□□□ -0.36
USF1-203ENST00000368021 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.78□□□□□ -0.36
USF1-203ENST00000368021 HUS1O60921 280 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 UPP2O95045 317 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 MYOGP15173 224 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 MMP8P22894 467 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 MAGEA9P43362 315 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 WDR5P61964 334 aaKnown RBP12.78□□□□□ -0.36
USF1-203ENST00000368021 UPP1Q16831 310 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 SGO2Q562F6 1265 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 MEI1Q5TIA1 1274 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 GLB1LQ6UWU2 654 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 PASD1Q8IV76 773 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 KBTBD7Q8WVZ9 684 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 DDX27Q96GQ7 796 aaKnown RBP12.78□□□□□ -0.36
USF1-203ENST00000368021 UROC1Q96N76 676 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 TLR10Q9BXR5 811 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 TMEM161AQ9NX61 479 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 CTTNBP2NLQ9P2B4 639 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 SNX12Q9UMY4 172 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.78□□□□□ -0.36
USF1-203ENST00000368021 XIRP2A4UGR9 3374 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 ABHD14A-ACY1A0A1B0GW23 586 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 MYO1CO00159 1063 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 O00370 1275 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 PODXLO00592 558 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 BAIAP3O94812 1187 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 SLU7O95391 586 aaKnown RBP12.78□□□□□ -0.36
USF1-203ENST00000368021 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.36
USF1-203ENST00000368021 CLCNKBP51801 687 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 TUSC3Q13454 348 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 WHAMMP3Q1A5X7 153 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 C11orf63Q6NUN7 778 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 EGFL6Q8IUX8 553 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 HEXIM2Q96MH2 286 aaKnown RBP12.78□□□□□ -0.36
USF1-203ENST00000368021 FAM161BQ96MY7 647 aa12.78□□□□□ -0.36
USF1-203ENST00000368021 ADAM22Q9P0K1 906 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms