RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 SLITRK1Q96PX8 696 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 HERPUD2Q9BSE4 406 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 ZMYND15Q9H091 742 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 SYNCQ9H7C4 482 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 CWC15Q9P013 229 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 CALCOCO1Q9P1Z2 691 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 ASIC3Q9UHC3 531 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 O00370 1275 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 MICAL2O94851 1124 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 RARGP13631 454 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 HOXA11P31270 313 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 GABRB2P47870 512 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 PSEN2P49810 448 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 PSMC1P62191 440 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 OGDHQ02218 1023 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 PRAMEF19Q5SWL8 479 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 ZFYVE27Q5T4F4 411 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 RASAL3Q86YV0 1011 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 SH2D3CQ8N5H7 860 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 OR2W6PQ8NHA6 318 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 ATG4AQ8WYN0 398 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 RNF25Q96BH1 459 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 SNX27Q96L92 541 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 HEXIM2Q96MH2 286 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 TWNKQ96RR1 684 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 TSPAN18Q96SJ8 248 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 HEMGNQ9BXL5 484 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 AP5M1Q9H0R1 490 aa19.32■□□□□ 0.68
PDLIM7-203ENST00000359895 TRIP12Q14669 1992 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 F8VP50 259 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 HAS3O00219 553 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 DARSP14868 501 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 FGFR4P22455 802 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 PSMA2P25787 234 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 RGS2P41220 211 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 ACAP1Q15027 740 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 LLGL1Q15334 1064 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 HADHQ16836 314 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 DRICH1Q6PGQ1 229 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 SPOCD1Q6ZMY3 1216 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 XYLT1Q86Y38 959 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 BEST2Q8NFU1 509 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 USP6NLQ92738 828 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 CCDC114Q96M63 670 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 KATNAL1Q9BW62 490 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 NT5C1AQ9BXI3 368 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 CYTH4Q9UIA0 394 aa19.31■□□□□ 0.68
PDLIM7-203ENST00000359895 SCN1AP35498 2009 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 GOLGA8SH3BPF8 625 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 M0QYV0 167 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 IGF2BP3O00425 579 aaKnown RBP eCLIP19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 KRT7P08729 469 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 ATF2P15336 505 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 IRAK1P51617 712 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 ZNF157P51786 506 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 KRT71Q3SY84 523 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 LRRC31Q6UY01 552 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 ZNF365Q70YC5 407 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 LRRC52Q8N7C0 313 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 CCDC89Q8N998 374 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 CCHCR1Q8TD31 782 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 IPO4Q8TEX9 1081 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 CENPHQ9H3R5 247 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 HMGXB4Q9UGU5 601 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 EFR3BQ9Y2G0 817 aa19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 R3HDM2Q9Y2K5 976 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-203ENST00000359895 RFC1P35251 1148 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 GPD2P43304 727 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 NDST1P52848 882 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 GNGT1P63211 74 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 ADAM17P78536 824 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 TMEM62Q0P6H9 643 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 KCTD19Q17RG1 926 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 TFDP3Q5H9I0 405 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 LCLAT1Q6UWP7 414 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 TRMT10CQ7L0Y3 403 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 SOCS4Q8WXH5 440 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 MCRS1Q96EZ8 462 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 CPXM1Q96SM3 734 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 OSMRQ99650 979 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 EPB41L4BQ9H329 900 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 SNTG2Q9NY99 539 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 FLRT1Q9NZU1 646 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 GINS2Q9Y248 185 aa19.29■□□□□ 0.68
PDLIM7-203ENST00000359895 ERBB2P04626 1255 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 ATF7P17544 494 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 PDCLQ13371 301 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 ORC1Q13415 861 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 ZBTB6Q15916 424 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 DNAJC21Q5F1R6 531 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 RHBDF2Q6PJF5 856 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 C17orf99Q6UX52 265 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 MFSD7Q6UXD7 560 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 CEP128Q6ZU80 1094 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 APBA2Q99767 749 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 TMEM109Q9BVC6 243 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 TRAIPQ9BWF2 469 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 TRIM6Q9C030 488 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 CNTN3Q9P232 1028 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 DRG1Q9Y295 367 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms