RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MSL3Q8N5Y2 521 aaKnown RBP6.01□□□□□ -1.45
CD47-201ENST00000355354 GTF3C2Q8WUA4 911 aaPredicted RBP6.01□□□□□ -1.45
CD47-201ENST00000355354 CCDC42Q96M95 316 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.01□□□□□ -1.45
CD47-201ENST00000355354 AGPAT3Q9NRZ7 376 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 EXOC1Q9NV70 894 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 PI4KBQ9UBF8 816 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 TEP1Q99973 2627 aaKnown RBP6.01□□□□□ -1.45
CD47-201ENST00000355354 COL27A1Q8IZC6 1860 aaPredicted RBP6.01□□□□□ -1.45
CD47-201ENST00000355354 NAV3Q8IVL0 2385 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 MAGEB3O15480 346 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 TRAPPC3O43617 180 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 USP12O75317 370 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 ARHGEF15O94989 841 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 LINGO3P0C6S8 592 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 AMPD1P23109 780 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 GLRA2P23416 452 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 CA5AP35218 305 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 RAP1GAPP47736 663 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 PDIA5Q14554 519 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 MESDQ14696 234 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 DZIP1Q86YF9 867 aaKnown RBP6.01□□□□□ -1.45
CD47-201ENST00000355354 SPATA6LQ8N4H0 392 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 BEGAINQ9BUH8 593 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 TANGO6Q9C0B7 1094 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 MARCOQ9UEW3 520 aaPredicted RBP6.01□□□□□ -1.45
CD47-201ENST00000355354 GIMAP2Q9UG22 337 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 SFMBT1Q9UHJ3 866 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 RABGAP1Q9Y3P9 1069 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 LRRK1Q38SD2 2015 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 EMSYQ7Z589 1322 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 RNF103O00237 685 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 NAP1L1P55209 391 aaKnown RBP6.01□□□□□ -1.45
CD47-201ENST00000355354 BTNL9Q6UXG8 535 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 ZNF720Q7Z2F6 126 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 FAM126BQ8IXS8 530 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 CYP2S1Q96SQ9 504 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 EIF2AK1Q9BQI3 630 aaKnown RBP6.01□□□□□ -1.45
CD47-201ENST00000355354 MAF1Q9H063 256 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 SLC40A1Q9NP59 571 aa6.01□□□□□ -1.45
CD47-201ENST00000355354 MPHOSPH10O00566 681 aaKnown RBP6□□□□□ -1.45
CD47-201ENST00000355354 CCL22O00626 93 aa6□□□□□ -1.45
CD47-201ENST00000355354 FTLP02792 175 aaPredicted RBP6□□□□□ -1.45
CD47-201ENST00000355354 PGK2P07205 417 aa6□□□□□ -1.45
CD47-201ENST00000355354 MX2P20592 715 aa6□□□□□ -1.45
CD47-201ENST00000355354 SOX11P35716 441 aa6□□□□□ -1.45
CD47-201ENST00000355354 ECT2LQ008S8 904 aa6□□□□□ -1.45
CD47-201ENST00000355354 NAB2Q15742 525 aa6□□□□□ -1.45
CD47-201ENST00000355354 CATIPQ7Z7H3 387 aa6□□□□□ -1.45
CD47-201ENST00000355354 TADA2BQ86TJ2 420 aa6□□□□□ -1.45
CD47-201ENST00000355354 DGKHQ86XP1 1220 aa6□□□□□ -1.45
CD47-201ENST00000355354 GMCL1P1Q8NEA9 526 aa6□□□□□ -1.45
CD47-201ENST00000355354 MYLIPQ8WY64 445 aa6□□□□□ -1.45
CD47-201ENST00000355354 PAWRQ96IZ0 340 aaKnown RBP6□□□□□ -1.45
CD47-201ENST00000355354 MAN1C1Q9NR34 630 aa6□□□□□ -1.45
CD47-201ENST00000355354 GPATCH2LQ9NWQ4 482 aa6□□□□□ -1.45
CD47-201ENST00000355354 ERVK-11Q9UQG0 969 aa6□□□□□ -1.45
CD47-201ENST00000355354 ACANP16112 2415 aa6□□□□□ -1.45
CD47-201ENST00000355354 GOLGA6BA6NDN3 693 aa6□□□□□ -1.45
CD47-201ENST00000355354 BEST1O76090 585 aa6□□□□□ -1.45
CD47-201ENST00000355354 RPS6P62753 249 aaKnown RBP6□□□□□ -1.45
CD47-201ENST00000355354 CALCRLQ16602 461 aa6□□□□□ -1.45
CD47-201ENST00000355354 LRRC36Q1X8D7 754 aa6□□□□□ -1.45
CD47-201ENST00000355354 C15orf59Q2T9L4 293 aaPredicted RBP6□□□□□ -1.45
CD47-201ENST00000355354 SNX29P2Q8IUI4 249 aa6□□□□□ -1.45
CD47-201ENST00000355354 GPR150Q8NGU9 434 aa6□□□□□ -1.45
CD47-201ENST00000355354 TMEM40Q8WWA1 233 aa6□□□□□ -1.45
CD47-201ENST00000355354 C11orf49Q9H6J7 331 aa6□□□□□ -1.45
CD47-201ENST00000355354 SCHIP1Q9P0W5 487 aaPredicted RBP6□□□□□ -1.45
CD47-201ENST00000355354 AASSQ9UDR5 926 aa6□□□□□ -1.45
CD47-201ENST00000355354 MYADML2A6NDP7 307 aa6□□□□□ -1.45
CD47-201ENST00000355354 CCP110O43303 1012 aa6□□□□□ -1.45
CD47-201ENST00000355354 CALM1P0DP23 149 aa6□□□□□ -1.45
CD47-201ENST00000355354 CALM2P0DP24 149 aa6□□□□□ -1.45
CD47-201ENST00000355354 CALM3P0DP25 149 aa6□□□□□ -1.45
CD47-201ENST00000355354 KCNC1P48547 511 aa6□□□□□ -1.45
CD47-201ENST00000355354 MYO1EQ12965 1108 aa6□□□□□ -1.45
CD47-201ENST00000355354 CAVIN4Q5BKX8 364 aa6□□□□□ -1.45
CD47-201ENST00000355354 C9orf50Q5SZB4 431 aa6□□□□□ -1.45
CD47-201ENST00000355354 FNBP1LQ5T0N5 605 aa6□□□□□ -1.45
CD47-201ENST00000355354 LRRC6Q86X45 466 aa6□□□□□ -1.45
CD47-201ENST00000355354 EFCAB13Q8IY85 973 aa6□□□□□ -1.45
CD47-201ENST00000355354 LRRC71Q8N4P6 559 aa6□□□□□ -1.45
CD47-201ENST00000355354 MZB1Q8WU39 189 aa6□□□□□ -1.45
CD47-201ENST00000355354 WNT8BQ93098 351 aa6□□□□□ -1.45
CD47-201ENST00000355354 MYEOVQ96EZ4 313 aa6□□□□□ -1.45
CD47-201ENST00000355354 RAVER2Q9HCJ3 691 aaKnown RBP6□□□□□ -1.45
CD47-201ENST00000355354 RBM28Q9NW13 759 aaKnown RBP6□□□□□ -1.45
CD47-201ENST00000355354 TBX10O75333 385 aa6□□□□□ -1.45
CD47-201ENST00000355354 CHN1P15882 459 aa6□□□□□ -1.45
CD47-201ENST00000355354 PIK3R1P27986 724 aa6□□□□□ -1.45
CD47-201ENST00000355354 PPP1R8Q12972 351 aaKnown RBP6□□□□□ -1.45
CD47-201ENST00000355354 KLF1Q13351 362 aaPredicted RBP6□□□□□ -1.45
CD47-201ENST00000355354 NEK10Q6ZWH5 1172 aa6□□□□□ -1.45
CD47-201ENST00000355354 NLRX1Q86UT6 975 aa6□□□□□ -1.45
CD47-201ENST00000355354 PIGZQ86VD9 579 aa6□□□□□ -1.45
CD47-201ENST00000355354 SESTD1Q86VW0 696 aa6□□□□□ -1.45
CD47-201ENST00000355354 CCDC25Q86WR0 208 aa6□□□□□ -1.45
CD47-201ENST00000355354 RIOX2Q8IUF8 465 aa6□□□□□ -1.45
CD47-201ENST00000355354 UNC45BQ8IWX7 931 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms