RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 PTGER2P43116 358 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 TAF6P49848 677 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 DYNC1I2Q13409 638 aaKnown RBP17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 PDK2Q15119 407 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 LRRC8EQ6NSJ5 796 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 ANGPTL8Q6UXH0 198 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 OTOP1Q7RTM1 612 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 NIPA1Q7RTP0 329 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 MRPL1Q9BYD6 325 aaKnown RBP17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 SLC13A4Q9UKG4 626 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 ANGPT2O15123 496 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 DPEP1P16444 411 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 BMP6P22004 513 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 HNRNPH1P31943 449 aaKnown RBP17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 FDFT1P37268 417 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 SLC26A2P50443 739 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 C1QBPQ07021 282 aaKnown RBP17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 DCAF4L1Q3SXM0 396 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 SLC47A2Q86VL8 602 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 ARID3BQ8IVW6 561 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 GPRC5AQ8NFJ5 357 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 ZNF669Q96BR6 464 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 KCNQ5Q9NR82 932 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 SLITRK3O94933 977 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 CDR2LQ86X02 465 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 EIF1ADQ8N9N8 165 aaKnown RBP17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 LRRN4CLQ8ND94 238 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 PBXIP1Q96AQ6 731 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 IDI2Q9BXS1 227 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 ASPSCR1Q9BZE9 553 aa17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 C20orf96Q9NUD7 363 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC11-201ENST00000334690 FRMPD4Q14CM0 1322 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 FAM86B1E9PN63 330 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 FAM86B2P0C5J1 330 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 GCNT1Q02742 428 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 CAPRIN1Q14444 709 aaKnown RBP17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 CNGA3Q16281 694 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 CLEC16AQ2KHT3 1053 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 CYB5D1Q6P9G0 228 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 CREG2Q8IUH2 290 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 ARMC2Q8NEN0 867 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 SLC7A14Q8TBB6 771 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 SPIRE2Q8WWL2 714 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 MAGEB18Q96M61 343 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 PARK7Q99497 189 aaKnown RBP17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 SLC24A2Q9UI40 661 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 TMCC1O94876 653 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 KCNA2P16389 499 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 IFNA8P32881 189 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 DGKDQ16760 1214 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 C2CD6Q53TS8 623 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 MROH9Q5TGP6 573 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 CEP70Q8NHQ1 597 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 CNPY3Q9BT09 278 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 HACD3Q9P035 362 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 PPME1Q9Y570 386 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 O00370 1275 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 ZNF484Q5JVG2 852 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 WDR49Q8IV35 697 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 ABRAQ8N0Z2 381 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 CYP2W1Q8TAV3 490 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 CATSPERBQ9H7T0 1116 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 PXMP2Q9NR77 195 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.81■□□□□ 0.446e-6■■□□□ 12.6
TRAPPC11-201ENST00000334690 PHTF1Q9UMS5 762 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 SCAF8Q9UPN6 1271 aaKnown RBP17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 SIK3Q9Y2K2 1263 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 DDX3XO00571 662 aaKnown RBP eCLIP17.81■□□□□ 0.444e-6■■■□□ 16.3
TRAPPC11-201ENST00000334690 FAM200BP0CF97 657 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 ITGA4P13612 1032 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 OTUD4Q01804 1114 aaKnown RBP17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 SEZ6Q53EL9 994 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 TAS2R42Q7RTR8 314 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 TFB1MQ8WVM0 346 aaKnown RBP17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 DNAJC9Q8WXX5 260 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 ABTB1Q969K4 478 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 VCPIP1Q96JH7 1222 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 POP1Q99575 1024 aaKnown RBP17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 DDX50Q9BQ39 737 aaKnown RBP17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 PCDHGC5Q9Y5F6 944 aa17.81■□□□□ 0.44
TRAPPC11-201ENST00000334690 SYCE1LA8MT33 242 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 NEMP1O14524 444 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 C6orf222P0C671 652 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 OCA2Q04671 838 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 MDH1BQ5I0G3 518 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 PCYOX1LQ8NBM8 494 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 ACSF2Q96CM8 615 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 CYP3A43Q9HB55 503 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 PRKAG2Q9UGJ0 569 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 POLIQ9UNA4 740 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 ENO3P13929 434 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 HOXD10P28358 340 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 SLC15A2Q16348 729 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 C16orf89Q6UX73 402 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 SLC5A5Q92911 643 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 PABPC5Q96DU9 382 aaKnown RBP17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 CISHQ9NSE2 258 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 NDFIP2Q9NV92 336 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 DPP3Q9NY33 737 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 SYNPO2Q9UMS6 1093 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms