RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 GLRA4Q5JXX5 417 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 FRA10AC1Q70Z53 315 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 NOP9Q86U38 636 aaKnown RBP17.99■□□□□ 0.47
GABRB3-202ENST00000311550 CHST13Q8NET6 341 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 MAGEB18Q96M61 343 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 ATRNO75882 1429 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 ZC3H11AO75152 810 aaKnown RBP eCLIP17.99■□□□□ 0.47
GABRB3-202ENST00000311550 DEUP1Q05D60 604 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 SPOCD1Q6ZMY3 1216 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 NLRP9Q7RTR0 991 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 MCOLN2Q8IZK6 566 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 FRMPD4Q14CM0 1322 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 HSD17B4P51659 736 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 USP10Q14694 798 aaKnown RBP17.99■□□□□ 0.47
GABRB3-202ENST00000311550 MTHFD1LQ6UB35 978 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 DDIASQ8IXT1 998 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 CGRRF1Q99675 332 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 TRIM15Q9C019 465 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 HEY2Q9UBP5 337 aa17.99■□□□□ 0.47
GABRB3-202ENST00000311550 C3orf70A6NLC5 250 aaPredicted RBP17.98■□□□□ 0.47
GABRB3-202ENST00000311550 ENO3P13929 434 aaPredicted RBP17.98■□□□□ 0.47
GABRB3-202ENST00000311550 TSPYL2Q9H2G4 693 aaPredicted RBP17.98■□□□□ 0.47
GABRB3-202ENST00000311550 TASP1Q9H6P5 420 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 ERAP1Q9NZ08 941 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 NAALADL1Q9UQQ1 740 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 RICTORQ6R327 1708 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.98■□□□□ 0.47
GABRB3-202ENST00000311550 HBP1O60381 514 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 CALCAP01258 141 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 DNAJC9Q8WXX5 260 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 NSL1Q96IY1 281 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 MAGEB5Q9BZ81 275 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 GH1P01241 217 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 CTSHP09668 335 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 AMPD2Q01433 879 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 PPATQ06203 517 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 MYBPC2Q14324 1141 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 PGM5Q15124 567 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 CCNG2Q16589 344 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 MED15Q96RN5 788 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 CISHQ9NSE2 258 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 DONSONQ9NYP3 566 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 MAGEB2O15479 319 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 DNAL1Q4LDG9 190 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 C4orf32Q8N8J7 132 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 EXD1Q8NHP7 514 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 SLC7A14Q8TBB6 771 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 NCLNQ969V3 563 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 KCNMB3Q9NPA1 279 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 LRRC8EQ6NSJ5 796 aa17.98■□□□□ 0.47
GABRB3-202ENST00000311550 TMA16Q96EY4 203 aaKnown RBP17.98■□□□□ 0.47
GABRB3-202ENST00000311550 ZBBXA8MT70 800 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 AIM2O14862 343 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 CSDE1O75534 798 aaKnown RBP17.97■□□□□ 0.47
GABRB3-202ENST00000311550 GJB6O95452 261 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 NPTXRO95502 500 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 C20orf96Q9NUD7 363 aaPredicted RBP17.97■□□□□ 0.47
GABRB3-202ENST00000311550 CES2O00748 559 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 KLC1Q07866 573 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 ECM1Q16610 540 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 LRRC6Q86X45 466 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 PAFAH2Q99487 392 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 C2orf69Q8N8R5 385 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 DCLK3Q9C098 648 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 HACD3Q9P035 362 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 BACE1P56817 501 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 PPP3CAQ08209 521 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 ZNF669Q96BR6 464 aaPredicted RBP17.97■□□□□ 0.47
GABRB3-202ENST00000311550 GANQ9H2C0 597 aa17.97■□□□□ 0.47
GABRB3-202ENST00000311550 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.97■□□□□ 0.47
GABRB3-202ENST00000311550 SMAPO00193 183 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 STIP1P31948 543 aaKnown RBP17.96■□□□□ 0.47
GABRB3-202ENST00000311550 ACTL9Q8TC94 416 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 PCDHAC2Q9Y5I4 1007 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 PGK2P07205 417 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 ACOT1Q86TX2 421 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 ABRAQ8N0Z2 381 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 XAB2Q9HCS7 855 aaKnown RBP17.96■□□□□ 0.47
GABRB3-202ENST00000311550 GRID1Q9ULK0 1009 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 ENO4A6NNW6 628 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 MEIS2O14770 477 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 BOLA3Q53S33 107 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 COBLL1Q53SF7 1204 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 STAMBPL1Q96FJ0 436 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 ASTN1O14525 1302 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 RARS2Q5T160 578 aaKnown RBP17.96■□□□□ 0.47
GABRB3-202ENST00000311550 TMEM154Q6P9G4 183 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 C1orf186Q6ZWK4 172 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 PACS2Q86VP3 889 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 KLK14Q9P0G3 267 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.96■□□□□ 0.47
GABRB3-202ENST00000311550 POLBP06746 335 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 LRRC23Q53EV4 343 aaPredicted RBP17.96■□□□□ 0.47
GABRB3-202ENST00000311550 PTPRN2Q92932 1015 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 DPP3Q9NY33 737 aa17.96■□□□□ 0.47
GABRB3-202ENST00000311550 VIRMAQ69YN4 1812 aaKnown RBP17.95■□□□□ 0.46
GABRB3-202ENST00000311550 ANKRD63C9JTQ0 380 aa17.95■□□□□ 0.46
GABRB3-202ENST00000311550 DGKIO75912 1065 aa17.95■□□□□ 0.46
GABRB3-202ENST00000311550 PPHLN1Q8NEY8 458 aaKnown RBP17.95■□□□□ 0.46
GABRB3-202ENST00000311550 SCFD2Q8WU76 684 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms