RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 FAM189A1O60320 539 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 MSCO60682 206 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 CALB1P05937 261 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 KRT16P08779 473 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 RPA3P35244 121 aaPredicted RBP15.93■□□□□ 0.14
CSDC2-201ENST00000306149 VCPP55072 806 aaKnown RBP15.93■□□□□ 0.14
CSDC2-201ENST00000306149 TRPC3Q13507 836 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 EFTUD2Q15029 972 aaKnown RBP eCLIP15.93■□□□□ 0.14
CSDC2-201ENST00000306149 OASLQ15646 514 aaKnown RBP15.93■□□□□ 0.14
CSDC2-201ENST00000306149 LY6KQ17RY6 165 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 ACCSLQ4AC99 568 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 RNF149Q8NC42 400 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 STAMBPL1Q96FJ0 436 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 NIFKQ9BYG3 293 aaKnown RBP15.93■□□□□ 0.14
CSDC2-201ENST00000306149 KLHL14Q9P2G3 628 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 KCNG1Q9UIX4 513 aa15.93■□□□□ 0.14
CSDC2-201ENST00000306149 FARP2O94887 1054 aaPredicted RBP15.92■□□□□ 0.14
CSDC2-201ENST00000306149 CD48P09326 243 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 CCNB1P14635 433 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 IL1R2P27930 398 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 ABCD1P33897 745 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 TCF7P36402 384 aaPredicted RBP15.92■□□□□ 0.14
CSDC2-201ENST00000306149 CDH8P55286 799 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 IL9RQ01113 521 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 DALRD3Q5D0E6 543 aaKnown RBP15.92■□□□□ 0.14
CSDC2-201ENST00000306149 SYCP2LQ5T4T6 812 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 ANKRD22Q5VYY1 191 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 KIAA0319LQ8IZA0 1049 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 CYTH4Q9UIA0 394 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 ZNF112Q9UJU3 913 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 AGTPBP1Q9UPW5 1226 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 STAM2O75886 525 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 SSTR1P30872 391 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 TARBP2Q15633 366 aaKnown RBP15.92■□□□□ 0.14
CSDC2-201ENST00000306149 RNASEH2BQ5TBB1 312 aaKnown RBP15.92■□□□□ 0.14
CSDC2-201ENST00000306149 ARFGAP1Q8N6T3 406 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 AGAP11Q8TF27 550 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 NIF3L1Q9GZT8 377 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 C12orf65Q9H3J6 166 aaKnown RBP15.92■□□□□ 0.14
CSDC2-201ENST00000306149 NRBP2Q9NSY0 501 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 HOXC10Q9NYD6 342 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 PCSK1NQ9UHG2 260 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 ASMTLO95671 621 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 KRT19P08727 400 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 RPSAP08865 295 aaKnown RBP15.92■□□□□ 0.14
CSDC2-201ENST00000306149 CA4P22748 312 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 PSMA2P25787 234 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 NR1H3Q13133 447 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 SLC1A5Q15758 541 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 DUOXA2Q1HG44 320 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 PTPN20Q4JDL3 420 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 MSS51Q4VC12 460 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 PPP1R15BQ5SWA1 713 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 TREML2Q5T2D2 321 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 WDR49Q8IV35 697 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 ACTL9Q8TC94 416 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 TRAPPC12Q8WVT3 735 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 C12orf42Q96LP6 360 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 TMEM134Q9H6X4 195 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 C15orf41Q9Y2V0 281 aa15.92■□□□□ 0.14
CSDC2-201ENST00000306149 LCTP09848 1927 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 C19orf81C9J6K1 198 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 B4GALT5O43286 388 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 KIF1CO43896 1103 aaKnown RBP15.91■□□□□ 0.14
CSDC2-201ENST00000306149 CST8O60676 142 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 TOM1L1O75674 476 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 OTUD4Q01804 1114 aaKnown RBP15.91■□□□□ 0.14
CSDC2-201ENST00000306149 TAF5Q15542 800 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 ZNF699Q32M78 642 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 DONSONQ9NYP3 566 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 IGKV6D-21A0A0A0MT36 114 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 ATP2A1O14983 1001 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 ZBTB7AO95365 584 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 ICAM3P32942 547 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 GPX6P59796 221 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 LAMTOR4Q0VGL1 99 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 TFDP1Q14186 410 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 FNBP1LQ5T0N5 605 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 TMEM192Q8IY95 271 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 KLRG1Q96E93 195 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 RSRC1Q96IZ7 334 aaKnown RBP15.91■□□□□ 0.14
CSDC2-201ENST00000306149 ACO2Q99798 780 aaKnown RBP15.91■□□□□ 0.14
CSDC2-201ENST00000306149 MAK16Q9BXY0 300 aaKnown RBP15.91■□□□□ 0.14
CSDC2-201ENST00000306149 MRPL4Q9BYD3 311 aaKnown RBP15.91■□□□□ 0.14
CSDC2-201ENST00000306149 UBN1Q9NPG3 1134 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 NOP53Q9NZM5 478 aaKnown RBP15.91■□□□□ 0.14
CSDC2-201ENST00000306149 PHTF1Q9UMS5 762 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 DOCK1Q14185 1865 aa15.91■□□□□ 0.14
CSDC2-201ENST00000306149 TCRBV7S3A2A0A539 114 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 WDR91A4D1P6 747 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 GOLGA8RI6L899 631 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 CSDE1O75534 798 aaKnown RBP15.9■□□□□ 0.14
CSDC2-201ENST00000306149 PRKCBP05771 671 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 CCND1P24385 295 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 GBP2P32456 591 aaPredicted RBP15.9■□□□□ 0.14
CSDC2-201ENST00000306149 ASPAP45381 313 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 LACTBP83111 547 aaPredicted RBP15.9■□□□□ 0.14
CSDC2-201ENST00000306149 MCL1Q07820 350 aa15.9■□□□□ 0.14
CSDC2-201ENST00000306149 PIGHQ14442 188 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms