RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 NR1H3Q13133 447 aa20.78■□□□□ 0.92
NEIL3-201ENST00000264596 ZNF699Q32M78 642 aa20.78■□□□□ 0.92
NEIL3-201ENST00000264596 LRRC71Q8N4P6 559 aa20.78■□□□□ 0.92
NEIL3-201ENST00000264596 SMC6Q96SB8 1091 aa20.78■□□□□ 0.92
NEIL3-201ENST00000264596 TACO1Q9BSH4 297 aaKnown RBP20.78■□□□□ 0.92
NEIL3-201ENST00000264596 NXF1Q9UBU9 619 aaKnown RBP20.78■□□□□ 0.92
NEIL3-201ENST00000264596 STK38LQ9Y2H1 464 aa20.78■□□□□ 0.92
NEIL3-201ENST00000264596 AFG3L2Q9Y4W6 797 aa20.78■□□□□ 0.92
NEIL3-201ENST00000264596 MAFO75444 373 aaPredicted RBP20.77■□□□□ 0.92
NEIL3-201ENST00000264596 ITGAVP06756 1048 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 THNSL1Q8IYQ7 743 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 RNF149Q8NC42 400 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 JOSD2Q8TAC2 188 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 PRCCQ92733 491 aaPredicted RBP20.77■□□□□ 0.92
NEIL3-201ENST00000264596 NKD2Q969F2 451 aaPredicted RBP20.77■□□□□ 0.92
NEIL3-201ENST00000264596 ACO2Q99798 780 aaKnown RBP20.77■□□□□ 0.92
NEIL3-201ENST00000264596 PCDH9Q9HC56 1237 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 POLIQ9UNA4 740 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 ALOX15BO15296 676 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 PRKCBP05771 671 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 KRT16P08779 473 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 RPA3P35244 121 aaPredicted RBP20.77■□□□□ 0.92
NEIL3-201ENST00000264596 RAP1GAPP47736 663 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 GDF10P55107 478 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 MTM1Q13496 603 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 NEDD9Q14511 834 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 FAM160B1Q5W0V3 765 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 RNF43Q68DV7 783 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 CDR2LQ86X02 465 aaPredicted RBP20.77■□□□□ 0.92
NEIL3-201ENST00000264596 ZNF518BQ9C0D4 1074 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 MCM8Q9UJA3 840 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 GRID1Q9ULK0 1009 aa20.77■□□□□ 0.92
NEIL3-201ENST00000264596 A0A1W2PPM1 405 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 OGTO15294 1046 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 EIF4BP23588 611 aaKnown RBP20.76■□□□□ 0.91
NEIL3-201ENST00000264596 PTPN7P35236 360 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 ASPAP45381 313 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 LACTBP83111 547 aaPredicted RBP20.76■□□□□ 0.91
NEIL3-201ENST00000264596 OTUD4Q01804 1114 aaKnown RBP20.76■□□□□ 0.91
NEIL3-201ENST00000264596 TAP1Q03518 808 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 ORC1Q13415 861 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 SPARCL1Q14515 664 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 PTPN20Q4JDL3 420 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 TDRPQ86YL5 185 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 ANKLE1Q8NAG6 615 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 ACTL9Q8TC94 416 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 GRAMD1AQ96CP6 724 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 KLRG1Q96E93 195 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 SLCO1B3Q9NPD5 702 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 UBN1Q9NPG3 1134 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 PPP1R1BQ9UD71 204 aaPredicted RBP20.76■□□□□ 0.91
NEIL3-201ENST00000264596 PHTF1Q9UMS5 762 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 SHOC2Q9UQ13 582 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 A8MUI8 341 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 PIAS1O75925 651 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 CA4P22748 312 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 EFNA5P52803 228 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 LAMTOR4Q0VGL1 99 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 ZNF268Q14587 947 aaPredicted RBP20.76■□□□□ 0.91
NEIL3-201ENST00000264596 EFTUD2Q15029 972 aaKnown RBP eCLIP20.76■□□□□ 0.91
NEIL3-201ENST00000264596 ANKRD22Q5VYY1 191 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 TRIM50Q86XT4 487 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 DHX37Q8IY37 1157 aaKnown RBP20.76■□□□□ 0.91
NEIL3-201ENST00000264596 CHST13Q8NET6 341 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 GIMAP7Q8NHV1 300 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 SLC35B2Q8TB61 432 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 DENND1AQ8TEH3 1009 aa20.76■□□□□ 0.91
NEIL3-201ENST00000264596 CPSF3Q9UKF6 684 aaKnown RBP20.76■□□□□ 0.91
NEIL3-201ENST00000264596 C3orf70A6NLC5 250 aaPredicted RBP20.75■□□□□ 0.91
NEIL3-201ENST00000264596 PRPF4O43172 522 aaKnown RBP eCLIP20.75■□□□□ 0.91
NEIL3-201ENST00000264596 CST8O60676 142 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 KRT3P12035 628 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 IL1R2P27930 398 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 CTCFP49711 727 aaPredicted RBP20.75■□□□□ 0.91
NEIL3-201ENST00000264596 HIRAP54198 1017 aaPredicted RBP20.75■□□□□ 0.91
NEIL3-201ENST00000264596 GRM1Q13255 1194 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 MAPK6Q16659 721 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 HIF1AQ16665 826 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 CCDC142Q17RM4 750 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 LY6KQ17RY6 165 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 TMEM130Q8N3G9 435 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 EMC1Q8N766 993 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 NIPA2Q8N8Q9 360 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 CYTH4Q9UIA0 394 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 PCDHGC3Q9UN70 934 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 L3MBTL1Q9Y468 752 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 KIF1CO43896 1103 aaKnown RBP20.75■□□□□ 0.91
NEIL3-201ENST00000264596 KRT19P08727 400 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 HOXC6P09630 235 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 CDH5P33151 784 aaPredicted RBP20.75■□□□□ 0.91
NEIL3-201ENST00000264596 GPX6P59796 221 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 RIPK1Q13546 671 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 TMEM132AQ24JP5 1023 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 ZBTB8OSQ8IWT0 167 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 ARFGAP1Q8N6T3 406 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 CEP120Q8N960 986 aa20.75■□□□□ 0.91
NEIL3-201ENST00000264596 LRCH4O75427 683 aa20.74■□□□□ 0.91
NEIL3-201ENST00000264596 ITGBL1O95965 494 aaPredicted RBP20.74■□□□□ 0.91
NEIL3-201ENST00000264596 SSTR1P30872 391 aa20.74■□□□□ 0.91
NEIL3-201ENST00000264596 PSMC1P62191 440 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms