RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C YEA6P39953 335 aa2.74□□□□□ -1.97
VPS53YJL029C YIR035CP40579 254 aa2.74□□□□□ -1.97
VPS53YJL029C MRPL49P40858 161 aaPredicted RBP2.74□□□□□ -1.97
VPS53YJL029C ALG13P53178 202 aa2.74□□□□□ -1.97
VPS53YJL029C DYN2Q02647 92 aa2.74□□□□□ -1.97
VPS53YJL029C ERP1Q05359 219 aaKnown RBP2.74□□□□□ -1.97
VPS53YJL029C YCR022CP25620 114 aa2.73□□□□□ -1.97
VPS53YJL029C AVT5P38176 459 aa2.73□□□□□ -1.97
VPS53YJL029C YGR210CP42942 411 aa2.73□□□□□ -1.97
VPS53YJL029C YJL027CP47063 138 aaPredicted RBP2.73□□□□□ -1.97
VPS53YJL029C PNC1P53184 216 aaKnown RBP2.73□□□□□ -1.97
VPS53YJL029C BOR1P53838 576 aa2.73□□□□□ -1.97
VPS53YJL029C YMR082CQ04276 118 aa2.73□□□□□ -1.97
VPS53YJL029C YBR126W-AQ8TGU7 68 aa2.73□□□□□ -1.97
VPS53YJL029C YLR302CO13544 120 aa2.73□□□□□ -1.97
VPS53YJL029C PIS1P06197 220 aaKnown RBP2.73□□□□□ -1.97
VPS53YJL029C URA5P13298 226 aaKnown RBP2.73□□□□□ -1.97
VPS53YJL029C AUA1P32450 94 aa2.73□□□□□ -1.97
VPS53YJL029C SHB17P36136 271 aaKnown RBP2.73□□□□□ -1.97
VPS53YJL029C SDH8P38345 138 aa2.73□□□□□ -1.97
VPS53YJL029C ERV25P54837 211 aaKnown RBP2.73□□□□□ -1.97
VPS53YJL029C SCW10Q04951 389 aa2.73□□□□□ -1.97
VPS53YJL029C GEP3Q08622 556 aa2.73□□□□□ -1.97
VPS53YJL029C PAA1Q12447 191 aaKnown RBP2.73□□□□□ -1.97
VPS53YJL029C COA2Q3E823 68 aa2.73□□□□□ -1.97
VPS53YJL029C PPQ1P32945 549 aa2.72□□□□□ -1.97
VPS53YJL029C ECM33P38248 429 aaKnown RBP2.72□□□□□ -1.97
VPS53YJL029C IMD2P38697 523 aaKnown RBP2.72□□□□□ -1.97
VPS53YJL029C YEA4P40004 342 aa2.72□□□□□ -1.97
VPS53YJL029C YFR035CP43608 114 aa2.72□□□□□ -1.97
VPS53YJL029C PKP2P53170 491 aa2.72□□□□□ -1.97
VPS53YJL029C HST4P53688 370 aa2.72□□□□□ -1.97
VPS53YJL029C YPR063CQ12160 140 aa2.72□□□□□ -1.97
VPS53YJL029C YLR146W-AQ2V2P1 62 aa2.72□□□□□ -1.97
VPS53YJL029C FCY2P17064 533 aa2.71□□□□□ -1.97
VPS53YJL029C ELF1P36053 145 aa2.71□□□□□ -1.97
VPS53YJL029C LST7P53237 242 aa2.71□□□□□ -1.97
VPS53YJL029C YNL146C-AQ3E7Z1 64 aa2.71□□□□□ -1.97
VPS53YJL029C YHR213WP0CI67 198 aa2.71□□□□□ -1.98
VPS53YJL029C QCR9P22289 66 aa2.71□□□□□ -1.98
VPS53YJL029C UPS2P35200 230 aa2.71□□□□□ -1.98
VPS53YJL029C IMP2P46972 177 aa2.71□□□□□ -1.98
VPS53YJL029C MIC27P50945 234 aa2.71□□□□□ -1.98
VPS53YJL029C CAF40P53829 373 aa2.71□□□□□ -1.98
VPS53YJL029C OCA2P53949 197 aa2.71□□□□□ -1.98
VPS53YJL029C ORM2Q06144 216 aa2.71□□□□□ -1.98
VPS53YJL029C IRC23Q08416 157 aa2.71□□□□□ -1.98
VPS53YJL029C PRR2Q12310 699 aa2.71□□□□□ -1.98
VPS53YJL029C CDC7P06243 507 aa2.7□□□□□ -1.98
VPS53YJL029C RPS25BP0C0T4 108 aaKnown RBP2.7□□□□□ -1.98
VPS53YJL029C ACB1P31787 87 aa2.7□□□□□ -1.98
VPS53YJL029C SIP1P32578 815 aa2.7□□□□□ -1.98
VPS53YJL029C YGR269WP40326 108 aa2.7□□□□□ -1.98
VPS53YJL029C RPS25AQ3E792 108 aaPredicted RBP2.7□□□□□ -1.98
VPS53YJL029C TAR1Q8TGM6 124 aa2.7□□□□□ -1.98
VPS53YJL029C DDI2P0CH63 225 aa2.7□□□□□ -1.98
VPS53YJL029C DDI3P0CH64 225 aa2.7□□□□□ -1.98
VPS53YJL029C MRS3P10566 314 aa2.7□□□□□ -1.98
VPS53YJL029C CKS1P20486 150 aaKnown RBP2.7□□□□□ -1.98
VPS53YJL029C MRS4P23500 304 aa2.7□□□□□ -1.98
VPS53YJL029C GPI2P46961 280 aa2.7□□□□□ -1.98
VPS53YJL029C GLO1P50107 326 aa2.7□□□□□ -1.98
VPS53YJL029C DID2P69771 204 aa2.7□□□□□ -1.98
VPS53YJL029C COX12Q01519 83 aa2.7□□□□□ -1.98
VPS53YJL029C MRPS17Q03246 237 aaPredicted RBP2.7□□□□□ -1.98
VPS53YJL029C YPR013CQ12145 317 aa2.7□□□□□ -1.98
VPS53YJL029C POC4Q12245 148 aaPredicted RBP2.7□□□□□ -1.98
VPS53YJL029C CMC1P36064 111 aa2.69□□□□□ -1.98
VPS53YJL029C PHD1P36093 366 aa2.69□□□□□ -1.98
VPS53YJL029C SFT2P38166 215 aa2.69□□□□□ -1.98
VPS53YJL029C YBR292CP38357 123 aa2.69□□□□□ -1.98
VPS53YJL029C PET100P38958 111 aa2.69□□□□□ -1.98
VPS53YJL029C YJR015WP47090 510 aa2.69□□□□□ -1.98
VPS53YJL029C CAX4P53223 239 aa2.69□□□□□ -1.98
VPS53YJL029C YIP3P53633 176 aa2.69□□□□□ -1.98
VPS53YJL029C TIM11P81449 96 aaPredicted RBP2.69□□□□□ -1.98
VPS53YJL029C UBC7Q02159 165 aa2.69□□□□□ -1.98
VPS53YJL029C LOA1Q06508 300 aa2.69□□□□□ -1.98
VPS53YJL029C POS5Q06892 414 aa2.69□□□□□ -1.98
VPS53YJL029C RRT7Q07829 113 aa2.69□□□□□ -1.98
VPS53YJL029C YPR145C-AQ2V2P0 78 aa2.69□□□□□ -1.98
VPS53YJL029C MRPL20P22354 195 aaPredicted RBP2.69□□□□□ -1.98
VPS53YJL029C SRL3P36167 246 aa2.69□□□□□ -1.98
VPS53YJL029C YER137CP40083 148 aaKnown RBP2.69□□□□□ -1.98
VPS53YJL029C YNR066CP53752 436 aa2.69□□□□□ -1.98
VPS53YJL029C SHH3Q04487 196 aa2.69□□□□□ -1.98
VPS53YJL029C MSC3Q05812 728 aa2.69□□□□□ -1.98
VPS53YJL029C YDL242WQ07746 117 aa2.69□□□□□ -1.98
VPS53YJL029C ZRC1P20107 442 aa2.68□□□□□ -1.98
VPS53YJL029C YCR025CP25352 136 aa2.68□□□□□ -1.98
VPS53YJL029C YBL059WP34224 193 aa2.68□□□□□ -1.98
VPS53YJL029C AIM24P47127 394 aa2.68□□□□□ -1.98
VPS53YJL029C MIC26P50087 233 aa2.68□□□□□ -1.98
VPS53YJL029C RIB4P50861 169 aaPredicted RBP2.68□□□□□ -1.98
VPS53YJL029C MRX11Q03079 207 aa2.68□□□□□ -1.98
VPS53YJL029C YMR181CQ03231 154 aa2.68□□□□□ -1.98
VPS53YJL029C ANT1Q06497 328 aa2.68□□□□□ -1.98
VPS53YJL029C ATX2Q12067 313 aa2.68□□□□□ -1.98
VPS53YJL029C CCW12Q12127 133 aa2.68□□□□□ -1.98
VPS53YJL029C USV1Q12132 391 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 71.4 ms