RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W FPR2P32472 135 aa4.36□□□□□ -1.71
SHE10YGL228W TRS20P38334 175 aa4.36□□□□□ -1.71
SHE10YGL228W PAU13P38725 120 aa4.36□□□□□ -1.71
SHE10YGL228W DSK2P48510 373 aa4.36□□□□□ -1.71
SHE10YGL228W YPL108WQ02872 168 aaPredicted RBP4.36□□□□□ -1.71
SHE10YGL228W PAU10Q03050 120 aa4.36□□□□□ -1.71
SHE10YGL228W PAU20Q08322 120 aa4.36□□□□□ -1.71
SHE10YGL228W TY1A-GR1Q12085 440 aa4.36□□□□□ -1.71
SHE10YGL228W ERV2Q12284 196 aa4.36□□□□□ -1.71
SHE10YGL228W PAU9Q3E770 120 aa4.36□□□□□ -1.71
SHE10YGL228W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.36□□□□□ -1.71
SHE10YGL228W TY1A-OLQ92392 440 aaKnown RBP4.36□□□□□ -1.71
SHE10YGL228W CCW14O13547 238 aa4.35□□□□□ -1.71
SHE10YGL228W CDC7P06243 507 aa4.35□□□□□ -1.71
SHE10YGL228W RPS2P25443 254 aaKnown RBP4.35□□□□□ -1.71
SHE10YGL228W ALK2P32789 676 aaPredicted RBP4.35□□□□□ -1.71
SHE10YGL228W AVT5P38176 459 aa4.35□□□□□ -1.71
SHE10YGL228W CDS1P38221 457 aa4.35□□□□□ -1.71
SHE10YGL228W DOG2P38773 246 aa4.35□□□□□ -1.71
SHE10YGL228W DOG1P38774 246 aa4.35□□□□□ -1.71
SHE10YGL228W PET100P38958 111 aa4.35□□□□□ -1.71
SHE10YGL228W YER188WP40103 239 aa4.35□□□□□ -1.71
SHE10YGL228W DYN1P36022 4092 aa4.35□□□□□ -1.71
SHE10YGL228W TDH1P00360 332 aaKnown RBP4.35□□□□□ -1.71
SHE10YGL228W RPL15AP05748 204 aaKnown RBP4.35□□□□□ -1.71
SHE10YGL228W YCR041WP37265 110 aa4.35□□□□□ -1.71
SHE10YGL228W LSM2P38203 95 aaKnown RBP4.35□□□□□ -1.71
SHE10YGL228W SNU13P39990 126 aaKnown RBP4.35□□□□□ -1.71
SHE10YGL228W POG1P40473 351 aa4.35□□□□□ -1.71
SHE10YGL228W RPL15BP54780 204 aaPredicted RBP4.35□□□□□ -1.71
SHE10YGL228W YMR181CQ03231 154 aa4.35□□□□□ -1.71
SHE10YGL228W ATC1Q04005 294 aa4.35□□□□□ -1.71
SHE10YGL228W YPR145C-AQ2V2P0 78 aa4.35□□□□□ -1.71
SHE10YGL228W UTP20P35194 2493 aaKnown RBP4.34□□□□□ -1.71
SHE10YGL228W PET494P07390 489 aaPredicted RBP4.34□□□□□ -1.71
SHE10YGL228W FEN2P25621 512 aaKnown RBP4.34□□□□□ -1.71
SHE10YGL228W INO2P26798 304 aa4.34□□□□□ -1.71
SHE10YGL228W NTF2P33331 125 aaKnown RBP4.34□□□□□ -1.71
SHE10YGL228W RRT1P38192 103 aa4.34□□□□□ -1.71
SHE10YGL228W IMD2P38697 523 aaKnown RBP4.34□□□□□ -1.71
SHE10YGL228W SAS2P40963 338 aa4.34□□□□□ -1.71
SHE10YGL228W BNS1P50084 137 aa4.34□□□□□ -1.71
SHE10YGL228W SWT21P53873 357 aaPredicted RBP4.34□□□□□ -1.71
SHE10YGL228W YHR213WP0CI67 198 aa4.33□□□□□ -1.72
SHE10YGL228W PRS4P38063 326 aaPredicted RBP4.33□□□□□ -1.72
SHE10YGL228W SFT2P38166 215 aa4.33□□□□□ -1.72
SHE10YGL228W GLE2P40066 365 aa4.33□□□□□ -1.72
SHE10YGL228W PHS1P40857 217 aa4.33□□□□□ -1.72
SHE10YGL228W YJL027CP47063 138 aaPredicted RBP4.33□□□□□ -1.72
SHE10YGL228W HST4P53688 370 aa4.33□□□□□ -1.72
SHE10YGL228W LOA1Q06508 300 aa4.33□□□□□ -1.72
SHE10YGL228W AYT1Q12226 474 aa4.33□□□□□ -1.72
SHE10YGL228W YOR097CQ12274 175 aaPredicted RBP4.33□□□□□ -1.72
SHE10YGL228W COQ3P27680 312 aa4.32□□□□□ -1.72
SHE10YGL228W POP5P28005 173 aa4.32□□□□□ -1.72
SHE10YGL228W SOH1P38633 127 aa4.32□□□□□ -1.72
SHE10YGL228W HUA1P40325 198 aa4.32□□□□□ -1.72
SHE10YGL228W YIL163CP40448 117 aa4.32□□□□□ -1.72
SHE10YGL228W VPS55P47111 140 aa4.32□□□□□ -1.72
SHE10YGL228W YGR219WP53307 113 aa4.32□□□□□ -1.72
SHE10YGL228W CPD1P53314 239 aa4.32□□□□□ -1.72
SHE10YGL228W DUG3P53871 357 aa4.32□□□□□ -1.72
SHE10YGL228W SPG4Q04438 115 aa4.32□□□□□ -1.72
SHE10YGL228W LDS2Q08218 356 aa4.32□□□□□ -1.72
SHE10YGL228W RNA15P25299 296 aaPredicted RBP4.32□□□□□ -1.72
SHE10YGL228W LAC1P28496 418 aa4.32□□□□□ -1.72
SHE10YGL228W PHD1P36093 366 aa4.32□□□□□ -1.72
SHE10YGL228W ATG8P38182 117 aaRIP-Chip data4.32□□□□□ -1.72not detected
SHE10YGL228W VMA21P41806 77 aa4.32□□□□□ -1.72
SHE10YGL228W IMP2P46972 177 aa4.32□□□□□ -1.72
SHE10YGL228W HIT1P46973 164 aa4.32□□□□□ -1.72
SHE10YGL228W YNR071CP53757 342 aa4.32□□□□□ -1.72
SHE10YGL228W YML108WQ03759 105 aa4.32□□□□□ -1.72
SHE10YGL228W SDH7Q04401 133 aa4.32□□□□□ -1.72
SHE10YGL228W FIT2Q08906 153 aa4.32□□□□□ -1.72
SHE10YGL228W STF1P01098 86 aa4.31□□□□□ -1.72
SHE10YGL228W CYC3P06182 269 aa4.31□□□□□ -1.72
SHE10YGL228W SEC59P20048 519 aa4.31□□□□□ -1.72
SHE10YGL228W HMX1P32339 317 aa4.31□□□□□ -1.72
SHE10YGL228W AFR1P33304 620 aa4.31□□□□□ -1.72
SHE10YGL228W FIP1P45976 327 aa4.31□□□□□ -1.72
SHE10YGL228W TIM21P53220 239 aa4.31□□□□□ -1.72
SHE10YGL228W OCA2P53949 197 aa4.31□□□□□ -1.72
SHE10YGL228W RAV2Q03956 351 aa4.31□□□□□ -1.72
SHE10YGL228W HOR7Q05827 59 aa4.31□□□□□ -1.72
SHE10YGL228W MSA1Q08471 629 aa4.31□□□□□ -1.72
SHE10YGL228W TIM18Q08749 192 aa4.31□□□□□ -1.72
SHE10YGL228W ADH3P07246 375 aaKnown RBP4.3□□□□□ -1.72
SHE10YGL228W RPS22AP0C0W1 130 aaKnown RBP4.3□□□□□ -1.72
SHE10YGL228W HSP12P22943 109 aaKnown RBP4.3□□□□□ -1.72
SHE10YGL228W NNK1P36003 928 aa4.3□□□□□ -1.72
SHE10YGL228W MRPL4P36517 319 aa4.3□□□□□ -1.72
SHE10YGL228W YBR090CP38253 122 aa4.3□□□□□ -1.72
SHE10YGL228W PGD1P40356 397 aa4.3□□□□□ -1.72
SHE10YGL228W TOS8P53147 276 aa4.3□□□□□ -1.72
SHE10YGL228W TOM7P53507 60 aa4.3□□□□□ -1.72
SHE10YGL228W LRS4Q04087 347 aaKnown RBP4.3□□□□□ -1.72
SHE10YGL228W ACP1P32463 125 aa4.29□□□□□ -1.72
SHE10YGL228W YKL075CP36083 450 aa4.29□□□□□ -1.72
SHE10YGL228W MRPS9P38120 278 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms