RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 MYH11P35749 1972 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 ASPMQ8IZT6 3477 aa8.49□□□□□ -1.05
CLK1-215ENST00000621181 TTC26A0AVF1 554 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 PP2D1A8MPX8 630 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 EXTL3O43909 919 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 MBD3O95983 291 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 CLTAP09496 248 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 ZNF806P0C7X5 589 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 PLS3P13797 630 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 AARSP49588 968 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLK1-215ENST00000621181 GRSF1Q12849 480 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLK1-215ENST00000621181 MYBPC2Q14324 1141 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 TAF12Q16514 161 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 MGAT5BQ3V5L5 792 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 HS1BP3Q53T59 392 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 N4BP2L1Q5TBK1 243 aaPredicted RBP8.48□□□□□ -1.05
CLK1-215ENST00000621181 LRSAM1Q6UWE0 723 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 ZPBP2Q6X784 338 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 C4orf32Q8N8J7 132 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 TMEM161BQ8NDZ6 487 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 FBXO18Q8NFZ0 1043 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 GAB3Q8WWW8 586 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 LOXL4Q96JB6 756 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 TMEM209Q96SK2 561 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 NTPCRQ9BSD7 190 aaKnown RBP8.48□□□□□ -1.05
CLK1-215ENST00000621181 MKNK1Q9BUB5 465 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 TIPINQ9BVW5 301 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 TASP1Q9H6P5 420 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 RXFP3Q9NSD7 469 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 SLC8A2Q9UPR5 921 aa8.48□□□□□ -1.05
CLK1-215ENST00000621181 NUP210Q8TEM1 1887 aaPredicted RBP8.48□□□□□ -1.05
CLK1-215ENST00000621181 KIF26AQ9ULI4 1882 aaPredicted RBP8.48□□□□□ -1.05
CLK1-215ENST00000621181 CCDC163A0A0D9SF12 145 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 HNRNPDLO14979 420 aaKnown RBP8.47□□□□□ -1.05
CLK1-215ENST00000621181 ATG13O75143 517 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 MAPTP10636 758 aaKnown RBP8.47□□□□□ -1.05
CLK1-215ENST00000621181 ODC1P11926 461 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 TYMPP19971 482 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 CYP3A5P20815 502 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 GUCY2CP25092 1073 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 PMLP29590 882 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 CDC25CP30307 473 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 AVPR1AP37288 418 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 TNFSF9P41273 254 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 RAP1GAPP47736 663 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 GUCY2FP51841 1108 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 CDR1P51861 262 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 SHC2P98077 582 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 CYP4F8P98187 520 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 ST3GAL1Q11201 340 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 STPG1Q5TH74 334 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 PKN3Q6P5Z2 889 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 KCNK18Q7Z418 384 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 KBTBD6Q86V97 674 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 CCDC83Q8IWF9 413 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 FAM184AQ8NB25 1140 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 SPIRE2Q8WWL2 714 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 LPIN3Q9BQK8 851 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 SMG9Q9H0W8 520 aaKnown RBP8.47□□□□□ -1.05
CLK1-215ENST00000621181 LARSQ9P2J5 1176 aaKnown RBP8.47□□□□□ -1.05
CLK1-215ENST00000621181 PCDHB6Q9Y5E3 794 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 CEP295Q9C0D2 2601 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 FAM208BQ5VWN6 2430 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 LACTBL1A8MY62 500 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 H0YCG3 227 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 LAD1O00515 517 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 MPLP40238 635 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 TUFMP49411 452 aaKnown RBP8.47□□□□□ -1.05
CLK1-215ENST00000621181 LIG4P49917 911 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 LILRA4P59901 499 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 HMGN5P82970 282 aaKnown RBP8.47□□□□□ -1.05
CLK1-215ENST00000621181 BFSP1Q12934 665 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 ZBTB6Q15916 424 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 KYAT1Q16773 422 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 SLC39A12Q504Y0 691 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 DTHD1Q6ZMT9 781 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 SENP8Q96LD8 212 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 SMOC1Q9H4F8 434 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 EBF3Q9H4W6 596 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 RPF1Q9H9Y2 349 aaKnown RBP8.47□□□□□ -1.05
CLK1-215ENST00000621181 GKN1Q9NS71 199 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 HSFX1Q9UBD0 423 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 PCDHGA5Q9Y5G8 931 aa8.47□□□□□ -1.05
CLK1-215ENST00000621181 ZZEF1O43149 2961 aa8.46□□□□□ -1.05
CLK1-215ENST00000621181 ZNF638Q14966 1978 aaKnown RBP8.46□□□□□ -1.05
CLK1-215ENST00000621181 PPEF2O14830 753 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 TM4SF5O14894 197 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 EPN2O95208 641 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 WEE1P30291 646 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 NMT1P30419 496 aaKnown RBP8.46□□□□□ -1.06
CLK1-215ENST00000621181 AMPD2Q01433 879 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 RUNX3Q13761 415 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 TMEM196Q5HYL7 178 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 RNF43Q68DV7 783 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 PSAPL1Q6NUJ1 521 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 CC2D1AQ6P1N0 951 aaPredicted RBP8.46□□□□□ -1.06
CLK1-215ENST00000621181 ZSCAN30Q86W11 494 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 CMTM8Q8IZV2 173 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 OR10T2Q8NGX3 314 aa8.46□□□□□ -1.06
CLK1-215ENST00000621181 LLPHQ9BRT6 129 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms