RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 LINC01553A4QN01 128 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 PAEPP09466 180 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 CHRNB2P17787 502 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 FGFR3P22607 806 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 BRD2P25440 801 aaKnown RBP20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 PDE6CP51160 858 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 BPIFB4P59827 614 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 YWHAHQ04917 246 aaPredicted RBP20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 ELAVL2Q12926 359 aaKnown RBP20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 RAD9BQ6WBX8 426 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 C12orf29Q8N999 325 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 CCDC112Q8NEF3 446 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 OLIG1Q8TAK6 271 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 TMEM169Q96HH4 297 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 SYT11Q9BT88 431 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 BZW2Q9Y6E2 419 aaKnown RBP20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 PDE4DIPQ5VU43 2346 aa20.3■□□□□ 0.84
UBE2E3-209ENST00000602710 SYN3O14994 580 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 THAP12O43422 761 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 CFHP08603 1231 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 CD19P15391 556 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 PBX2P40425 430 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 CDR1P51861 262 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 PSMC1P62191 440 aaKnown RBP20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 CCDC142Q17RM4 750 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 RTP2Q5QGT7 225 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 VARS2Q5ST30 1063 aaKnown RBP20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 RNF168Q8IYW5 571 aaPredicted RBP20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 CRYBG2Q8N1P7 616 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 ZNF606Q8WXB4 792 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 AGPAT1Q99943 283 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 YBX2Q9Y2T7 364 aaKnown RBP20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.29■□□□□ 0.841e-8■■■■■ 28.9
UBE2E3-209ENST00000602710 NLRC5Q86WI3 1866 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 RANBP2P49792 3224 aaKnown RBP20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 CA3P07451 260 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 MMEP08473 750 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 BMP8BP34820 402 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 ASTE1Q2TB18 679 aaPredicted RBP20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 SMYD5Q6GMV2 418 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 KLHL23Q8NBE8 558 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 OR10T2Q8NGX3 314 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 SPATA18Q8TC71 538 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 TMEM209Q96SK2 561 aa20.29■□□□□ 0.84
UBE2E3-209ENST00000602710 SSU72P8A0A1W2PR75 194 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 FGF18O76093 207 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 OAZ2O95190 189 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 PTPN1P18031 435 aaKnown RBP20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 PPM1AP35813 382 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 BMPR1AP36894 532 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 FMO1Q01740 532 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 CDR2Q01850 454 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 GLYCTKQ8IVS8 523 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 B3GALNT2Q8NCR0 500 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 LNX1Q8TBB1 728 aaPredicted RBP20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 CCDC42Q96M95 316 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 SYT15Q9BQS2 421 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 C17orf80Q9BSJ5 609 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 TTPALQ9BTX7 342 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 CRTAC1Q9NQ79 661 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 FAM49BQ9NUQ9 324 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 ADAMTS1Q9UHI8 967 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 PCDHA11Q9Y5I1 949 aa20.28■□□□□ 0.84
UBE2E3-209ENST00000602710 A0A087X0T9 212 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 FAM170AA1A519 330 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 CARNS1A5YM72 827 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 DDX3XO00571 662 aaKnown RBP eCLIP20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 FAM228BP0C875 321 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 VDRP11473 427 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 TNFAIP3P21580 790 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 CTNNB1P35222 781 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 MRPL58Q14197 206 aaKnown RBP20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 USP41Q3LFD5 358 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 SGO2Q562F6 1265 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 PRSS55Q6UWB4 352 aaPredicted RBP20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 DDX53Q86TM3 631 aaKnown RBP20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 PALB2Q86YC2 1186 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 THEM5Q8N1Q8 247 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 TNIP3Q96KP6 325 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 PCDHB18PQ96TA0 734 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 ACBD6Q9BR61 282 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 DEF6Q9H4E7 631 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 CHST7Q9NS84 486 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 SPTLC3Q9NUV7 552 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 CDH9Q9ULB4 789 aa20.27■□□□□ 0.84
UBE2E3-209ENST00000602710 PLXNA4Q9HCM2 1894 aa20.26■□□□□ 0.83
UBE2E3-209ENST00000602710 MYBPHLA2RUH7 354 aa20.26■□□□□ 0.83
UBE2E3-209ENST00000602710 AKR1B10O60218 316 aa20.26■□□□□ 0.83
UBE2E3-209ENST00000602710 SOD2P04179 222 aa20.26■□□□□ 0.83
UBE2E3-209ENST00000602710 PCSK1P29120 753 aa20.26■□□□□ 0.83
UBE2E3-209ENST00000602710 KIF11P52732 1056 aa20.26■□□□□ 0.83
UBE2E3-209ENST00000602710 GFPT1Q06210 699 aaPredicted RBP20.26■□□□□ 0.83
UBE2E3-209ENST00000602710 PPP1R26Q5T8A7 1209 aaPredicted RBP20.26■□□□□ 0.83
UBE2E3-209ENST00000602710 TDHQ8IZJ6 230 aa20.26■□□□□ 0.83
UBE2E3-209ENST00000602710 SLC30A5Q8TAD4 765 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms