RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SPEM1Q8N4L4 309 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 OR10T2Q8NGX3 314 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 TMEM209Q96SK2 561 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 ASB7Q9H672 318 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 DSEQ9UL01 958 aa18.96■□□□□ 0.63
SHKBP1-203ENST00000594298 MYBPHLA2RUH7 354 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 NFICP08651 508 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 IDEP14735 1019 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 TUFMP49411 452 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 POU5F1Q01860 360 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 LRRC32Q14392 662 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 TMEM132DQ14C87 1099 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 LAIR1Q6GTX8 287 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 RALGPS2Q86X27 583 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 CEP57L1Q8IYX8 460 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 TTC9BQ8N6N2 239 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 DNAJC19Q96DA6 116 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 FAM212AQ96EL1 285 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 LRRC3BQ96PB8 259 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 ZCWPW1Q9H0M4 648 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 ATXN3LQ9H3M9 355 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 ST6GALNAC4Q9H4F1 302 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 KBTBD4Q9NVX7 518 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 CIZ1Q9ULV3 898 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 C2CD2Q9Y426 696 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 STYXL1Q9Y6J8 313 aa18.95■□□□□ 0.62
SHKBP1-203ENST00000594298 SLC38A8A6NNN8 435 aa18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 GABRR2P28476 465 aa18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 KPNA1P52294 538 aaPredicted RBP18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 ATXN1P54253 815 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 SATB1Q01826 763 aa18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 ARHGAP29Q52LW3 1261 aa18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 ARHGAP15Q53QZ3 475 aa18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 DGKKQ5KSL6 1271 aa18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 HVCN1Q96D96 273 aa18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 MRPL44Q9H9J2 332 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 PANK4Q9NVE7 773 aa18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 USP25Q9UHP3 1055 aa18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 RAB23Q9ULC3 237 aa18.94■□□□□ 0.62
SHKBP1-203ENST00000594298 WDR87Q6ZQQ6 2873 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 SPECC1L-ADORA2AF8WAN1 911 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 DPYSL4O14531 572 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 SOAT2O75908 522 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 NMT1P30419 496 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 CTHP32929 405 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 SOX9P48436 509 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 SMARCB1Q12824 385 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 ALCAMQ13740 583 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 WDR44Q5JSH3 913 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 GPR158Q5T848 1215 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 SLFN12LQ6IEE8 588 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 ZNF720Q7Z2F6 126 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 SFR1Q86XK3 245 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 C2orf15Q8WU43 125 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 TASP1Q9H6P5 420 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 PARD6AQ9NPB6 346 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 CDV3Q9UKY7 258 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 USP18Q9UMW8 372 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 EXOC7Q9UPT5 735 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 PCDHB13Q9Y5F0 798 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 TICRRQ7Z2Z1 1910 aa18.93■□□□□ 0.62
SHKBP1-203ENST00000594298 F5P12259 2224 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 A0A1W2PQ27 194 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 A0A1W2PQ64 194 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 A0A1W2PQD8 194 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 ANKRD63C9JTQ0 380 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 LRP3O75074 770 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 ATF6P18850 670 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 CDC25CP30307 473 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 CNR2P34972 360 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 ACOT2P49753 483 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 PLCB2Q00722 1185 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 VEPH1Q14D04 833 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 SLC39A12Q504Y0 691 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 CNNM4Q6P4Q7 775 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 TXNDC11Q6PKC3 985 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 STXBP4Q6ZWJ1 553 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 METTL23Q86XA0 190 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 BPIFB1Q8TDL5 484 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 SEPT5Q99719 369 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 C7orf25Q9BPX7 421 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 LPIN3Q9BQK8 851 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 RTKNQ9BST9 563 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 TRIM9Q9C026 710 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 IL21Q9HBE4 155 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 OLFML3Q9NRN5 406 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 ZMYM5Q9UJ78 669 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 MYH11P35749 1972 aa18.92■□□□□ 0.62
SHKBP1-203ENST00000594298 A0A1B0GVL5 298 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 FRMD3A2A2Y4 597 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 GOLGA6L4A6NEF3 574 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 K7ESF4 209 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 CYB561D2O14569 222 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 PRAMEF12O95522 483 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 RETP07949 1114 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 SLFN14P0C7P3 912 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 HOXA6P31267 233 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 TAF6P49848 677 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 ASIC1P78348 528 aa18.91■□□□□ 0.62
SHKBP1-203ENST00000594298 CCINQ13939 588 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms