RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ADAM22Q9P0K1 906 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMAD4-205ENST00000588745 INPP5FQ9Y2H2 1132 aa12.12□□□□□ -0.47
SMAD4-205ENST00000588745 SCN5AQ14524 2016 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 A8MXQ7 604 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 M0QYV0 167 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 MICAL2O94851 1124 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 POMCP01189 267 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 CALB1P05937 261 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 FAM163BP0C2L3 166 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 HSPA1AP0DMV8 641 aaKnown RBP12.11□□□□□ -0.47
SMAD4-205ENST00000588745 HSPA1BP0DMV9 641 aaKnown RBP12.11□□□□□ -0.47
SMAD4-205ENST00000588745 FGFR1P11362 822 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 PRLRP16471 622 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 TCP1P17987 556 aaKnown RBP12.11□□□□□ -0.47
SMAD4-205ENST00000588745 MMP8P22894 467 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 WARSP23381 471 aaKnown RBP12.11□□□□□ -0.47
SMAD4-205ENST00000588745 RRM1P23921 792 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 PTP4A2Q12974 167 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 STILQ15468 1287 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 CNGA2Q16280 664 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 UPP1Q16831 310 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 CLLU1OSQ5K130 101 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 LIN9Q5TKA1 542 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 GLB1LQ6UWU2 654 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 MMS22LQ6ZRQ5 1243 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 PEX26Q7Z412 305 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 PDCL2Q8N4E4 241 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 MNS1Q8NEH6 495 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 CARD6Q9BX69 1037 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 DNAI2Q9GZS0 605 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 WNT8AQ9H1J5 351 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 ELAC1Q9H777 363 aaKnown RBP12.11□□□□□ -0.47
SMAD4-205ENST00000588745 TMEM161AQ9NX61 479 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 CACNG4Q9UBN1 327 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 TBX21Q9UL17 535 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 SCINQ9Y6U3 715 aa12.11□□□□□ -0.47
SMAD4-205ENST00000588745 CYB561D2O14569 222 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 CTIFO43310 598 aaKnown RBP12.1□□□□□ -0.47
SMAD4-205ENST00000588745 SRGAP2O75044 1071 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 KIF4AO95239 1232 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 CXCL10P02778 98 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 AARSP49588 968 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMAD4-205ENST00000588745 GOLGA7BQ2TAP0 167 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 C2CD6Q53TS8 623 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 PLEKHA7Q6IQ23 1121 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 LCLAT1Q6UWP7 414 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 ACOT1Q86TX2 421 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 NT5DC3Q86UY8 548 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 WDTC1Q8N5D0 677 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 CEP112Q8N8E3 955 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 C3orf58Q8NDZ4 430 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 URGCPQ8TCY9 931 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 DDX27Q96GQ7 796 aaKnown RBP12.1□□□□□ -0.47
SMAD4-205ENST00000588745 SCLYQ96I15 445 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 PAAF1Q9BRP4 392 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 PPP1R12CQ9BZL4 782 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 SNX25Q9H3E2 840 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 C11orf49Q9H6J7 331 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 MRPL47Q9HD33 250 aaKnown RBP12.1□□□□□ -0.47
SMAD4-205ENST00000588745 ABCB6Q9NP58 842 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 CHORDC1Q9UHD1 332 aaPredicted RBP12.1□□□□□ -0.47
SMAD4-205ENST00000588745 TSPAN16Q9UKR8 245 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 PACSIN2Q9UNF0 486 aaPredicted RBP12.1□□□□□ -0.47
SMAD4-205ENST00000588745 ATP11BQ9Y2G3 1177 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 STXBP5LQ9Y2K9 1186 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 CEP350Q5VT06 3117 aa12.1□□□□□ -0.47
SMAD4-205ENST00000588745 HCRTO43612 131 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 PAX3P23760 479 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 IGFBP6P24592 240 aaPredicted RBP12.09□□□□□ -0.47
SMAD4-205ENST00000588745 CYP2C18P33260 490 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 GNL1P36915 607 aaPredicted RBP12.09□□□□□ -0.47
SMAD4-205ENST00000588745 CCL23P55773 120 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 CKAP4Q07065 602 aaKnown RBP12.09□□□□□ -0.47
SMAD4-205ENST00000588745 RPS6KA1Q15418 735 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 TCTN1Q2MV58 587 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 PTPN20Q4JDL3 420 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 ARHGAP17Q68EM7 881 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 LLGL2Q6P1M3 1020 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 DSTYKQ6XUX3 929 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 OSTM1Q86WC4 334 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 ERICH1Q86X53 443 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 CRYBG2Q8N1P7 616 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 TMEM86AQ8N2M4 240 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 C12orf29Q8N999 325 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 MSANTD4Q8NCY6 345 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 LRRN4CLQ8ND94 238 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 SENP8Q96LD8 212 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 DPEP3Q9H4B8 488 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 CYTH4Q9UIA0 394 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 AMFRQ9UKV5 643 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 STRIP2Q9ULQ0 834 aa12.09□□□□□ -0.47
SMAD4-205ENST00000588745 TET1Q8NFU7 2136 aa12.08□□□□□ -0.47
SMAD4-205ENST00000588745 TMEM110-MUSTN1A8MSY1 372 aa12.08□□□□□ -0.48
SMAD4-205ENST00000588745 ENPP3O14638 875 aa12.08□□□□□ -0.48
SMAD4-205ENST00000588745 GABRDO14764 452 aa12.08□□□□□ -0.48
SMAD4-205ENST00000588745 TADA3O75528 432 aa12.08□□□□□ -0.48
SMAD4-205ENST00000588745 CLTBP09497 229 aa12.08□□□□□ -0.48
SMAD4-205ENST00000588745 SETSIPP0DME0 302 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms