RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 RBM12Q9NTZ6 932 aaKnown RBP6.15□□□□□ -1.42
SDF2-206ENST00000587788 VPS18Q9P253 973 aa6.15□□□□□ -1.42
SDF2-206ENST00000587788 STXBP5LQ9Y2K9 1186 aa6.15□□□□□ -1.42
SDF2-206ENST00000587788 COQ4Q9Y3A0 265 aa6.15□□□□□ -1.42
SDF2-206ENST00000587788 EMSYQ7Z589 1322 aa6.15□□□□□ -1.43
SDF2-206ENST00000587788 A0A1W2PQ45 241 aaPredicted RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 A0A1W2PQY0 241 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 SLC35F4A4IF30 521 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 TMCO5BA8MYB1 307 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 FOXN3O00409 490 aaPredicted RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 KRIT1O00522 736 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 SLC16A4O15374 487 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 DYNC1LI2O43237 492 aaPredicted RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 ZNF862O60290 1169 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 CEP104O60308 925 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 ZEB2O60315 1214 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 RTN2O75298 545 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 ERLIN2O94905 339 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 HEXIM1O94992 359 aaKnown RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 LDHAP00338 332 aaKnown RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 ASGR1P07306 291 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 TRIM49P0CI25 452 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 TRIM49CP0CI26 452 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 GNAT1P11488 350 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 SYN1P17600 705 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 TMOD1P28289 359 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 CST5P28325 142 aaPredicted RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 CXCR5P32302 372 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 MATR3P43243 847 aaKnown RBP eCLIP6.14□□□□□ -1.43
SDF2-206ENST00000587788 NPTX2P47972 431 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 CPT1AP50416 773 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 GPC3P51654 580 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 EFNA5P52803 228 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 ACLYP53396 1101 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 GJA9P57773 515 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 TAGLNQ01995 201 aaKnown RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 ARHGAP1Q07960 439 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 TARBP2Q15633 366 aaKnown RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 TRIP4Q15650 581 aaPredicted RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 KCNA10Q16322 511 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 SNRNP35Q16560 246 aaKnown RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 HSDL1Q3SXM5 330 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 SPDYCQ5MJ68 293 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 CFAP58Q5T655 872 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 SLFN12LQ6IEE8 588 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 LRIG3Q6UXM1 1119 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 LRRC69Q6ZNQ3 347 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 NT5DC3Q86UY8 548 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 ZNF677Q86XU0 584 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 CCDC60Q8IWA6 550 aaPredicted RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 ARRDC4Q8NCT1 418 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 LNX1Q8TBB1 728 aaPredicted RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 SLC35G2Q8TBE7 412 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 ATP8B4Q8TF62 1192 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 PPP1R13LQ8WUF5 828 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 DPF3Q92784 378 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 TRIM11Q96F44 468 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 NT5C1BQ96P26 610 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 KRT12Q99456 494 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 SH3GL2Q99962 352 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 HTATIP2Q9BUP3 242 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 PLVAPQ9BX97 442 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 FAM129AQ9BZQ8 928 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 GPR88Q9GZN0 384 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 DHX33Q9H6R0 707 aaKnown RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 BCAS3Q9H6U6 928 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 ATP6V0A4Q9HBG4 840 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 EPB41L5Q9HCM4 733 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 ST7Q9NRC1 585 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 FAM114A2Q9NRY5 505 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.14□□□□□ -1.43
SDF2-206ENST00000587788 KIAA1522Q9P206 1035 aaPredicted RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 UVRAGQ9P2Y5 699 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 ZMYND8Q9ULU4 1186 aaPredicted RBP6.14□□□□□ -1.43
SDF2-206ENST00000587788 PHF24Q9UPV7 400 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 FAN1Q9Y2M0 1017 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 TELO2Q9Y4R8 837 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 KCNMB2Q9Y691 235 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 IGSF9BQ9UPX0 1349 aa6.14□□□□□ -1.43
SDF2-206ENST00000587788 IGKV6-21A0A0C4DH24 114 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 DENND3A2RUS2 1198 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 GOLGA6CA6NDK9 693 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 GOLGA6L10A6NI86 522 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 ZNF233A6NK53 670 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 CCDC169A6NNP5 214 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 K7ERI5 159 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 EXTL3O43909 919 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 MAN1A2O60476 641 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 SORBS3O60504 671 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 BUB1BO60566 1050 aaPredicted RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 SYF2O95926 243 aaKnown RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 PIGRP01833 764 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 FTLP02792 175 aaPredicted RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 RPLP1P05386 114 aaKnown RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 RPLP2P05387 115 aaKnown RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 GOLGA6DP0CG33 693 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 FAM157BP0CG42 384 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 MYBL1P10243 752 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 HOXD8P13378 290 aaPredicted RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 CAPN2P17655 700 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms